Flavobacterium cerinum: NOX80_08890
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Entry
NOX80_08890 CDS
T09039
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
fcu
Flavobacterium cerinum
Pathway
fcu01501
beta-Lactam resistance
fcu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
fcu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NOX80_08890
01503 Cationic antimicrobial peptide (CAMP) resistance
NOX80_08890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fcu03036
]
NOX80_08890
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fcu02000
]
NOX80_08890
01504 Antimicrobial resistance genes [BR:
fcu01504
]
NOX80_08890
Chromosome and associated proteins [BR:
fcu03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NOX80_08890
Transporters [BR:
fcu02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NOX80_08890
Antimicrobial resistance genes [BR:
fcu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NOX80_08890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
YknX_C
BSH_CusB
Biotin_lipoyl
HH_MFP_RND
BSH_YknX
RND-MFP_C
CzcB_C
BSH_CzcB
HH_AprE
HH_CzcB
BSH_YhbJ
QRPTase_N
NQRA_N
HH_EMRA
Motif
Other DBs
NCBI-ProteinID:
UUC47301
UniProt:
A0ABY5J0L7
LinkDB
All DBs
Position
complement(1986604..1987731)
Genome browser
AA seq
375 aa
AA seq
DB search
MKFIQSYRNSNLVILLLVAATLFSCGQKEADLSQQIPKPEVDFLTVESGTGAINKKYPGM
IEGSVNVAIKAQVSGYLEAIFVKEGDYVQKGQALFKIKGDVYEEQVNNSSAAYKNAEANL
ANAKLEVEKIRPLVEGKVYAPIQLKTAEANYEAAKAQLAQAKATLGSSRINADFSLIKAP
VSGYISRIPNRIGNLVTPGDTEPLTTLSDINTVFVYFSLSEADYLAFLKDTADNKGVQLI
LADGSTYEHKGTVEIASGNIDRTTGSIALKAIFPNPKKYLRSGGSARVILNSNLSAVTSV
PMASVKDIQDKFFVFILKGNKVAMTPIEIAGSTDSNYFVSKGIKSGDKVALNNIDALSDG
LEITPKVSASTQEKK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatccaaagctatcgcaatagtaacctggtaattcttttactggttgcagcc
acattattctcatgcgggcaaaaagaagctgatctttcacaacaaataccaaaacccgaa
gttgactttttaacggtagaatccggtacgggtgctatcaataaaaaatatccggggatg
atcgaaggaagtgtcaatgttgccataaaagcacaggtttccggttatcttgaggctatt
tttgtaaaagaaggcgactacgttcaaaaaggacaggcactatttaaaattaagggtgat
gtttatgaagaacaagtcaataacagtagtgctgcgtacaaaaatgctgaggcaaatctg
gccaatgccaaactggaagtggaaaaaataagacctttagtcgaaggaaaagtatatgct
ccgatacagttaaaaaccgccgaagctaactatgaagctgcgaaagcgcaacttgcccag
gcaaaagcaacgttgggttcttcccgtattaacgccgatttctctttgatcaaagcaccg
gtaagcggatatatcagtcgtattccaaatcgtatcgggaaccttgtcactccgggtgat
actgaaccacttaccactttatcagatattaatacggtatttgtttacttttccttaagt
gaagccgattatctggcttttcttaaagatactgccgacaataaaggggtacaacttatt
ttggccgatggcagcacctacgaacataaaggcactgtagaaattgccagcgggaatatc
gacagaacaaccggaagtatcgccttaaaagccatcttcccgaatccgaaaaaatatctg
cgctccggcggttcagccagagtaatcttaaacagcaatctatcggcagttaccagcgta
ccgatggccagcgtaaaagacatacaggataagttctttgtattcatcttaaaaggaaat
aaagttgcgatgacacctattgaaattgccggaagtactgatagcaattactttgtaagc
aagggcatcaaatcaggcgacaaggtggcactaaacaacatcgatgcgttgtccgacggg
ttggaaattactcccaaagtaagcgcatcaacacaggaaaaaaaataa
DBGET
integrated database retrieval system
