KEGG   Fragilariopsis cylindrus: FRACYDRAFT_160865
Entry
FRACYDRAFT_160865 CDS       T04784                                 
Name
(GenBank) DNA glycosylase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    FRACYDRAFT_160865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fcy03400]
    FRACYDRAFT_160865
Enzymes [BR:fcy01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     FRACYDRAFT_160865
DNA repair and recombination proteins [BR:fcy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     FRACYDRAFT_160865
 Prokaryotic type
     FRACYDRAFT_160865
SSDB
Motif
Pfam: HhH-GPD HHH_2 HHH Ogg-HhH ENOD93
Other DBs
NCBI-ProteinID: OEU08072
JGI: 160865
UniProt: A0A1E7EQ37
LinkDB
Position
Unknown
AA seq 174 aa
KQDDLNLFAFQTLIGLILSPAVSDEAVIDAMKNLASKGLFSSIDALANASVSVVLSCLAH
LNYNNKKAGYIIDAAKYIVTNCNSKVPRSFEKLQEIRGVGEKVAALTLLEGFDDDSHAIY
GIDSHMYKLFRTYLNWVDIEDTTITMMAIRLKTWLPQHYWKQLNPIFSGLGQLF
NT seq 522 nt   +upstreamnt  +downstreamnt
aagcaagacgatctaaatctgtttgcttttcagaccttgataggtttgattctaagccca
gcagtgagcgatgaggccgttattgatgcaatgaaaaatcttgcttctaaaggtctgttt
tcgtctattgatgcgttagcaaatgcatcggttagtgttgttctgtcttgtcttgctcat
cttaattataataataaaaaggcaggatatattattgatgctgctaaatatatcgttact
aactgcaattctaaagtgcctcgttcattcgaaaaattacaggaaataagaggggttgga
gagaaagtggctgcattgacactcttggaaggatttgacgatgattcccatgctatttac
ggtattgattcccatatgtacaaattatttcgaacgtacttaaactgggttgatattgaa
gatactaccattacaatgatggcgataagactcaaaacatggttacctcaacattattgg
aaacaactaaatccgattttttcgggactgggacagctcttt

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