Fragilariopsis cylindrus: FRACYDRAFT_162373
Help
Entry
FRACYDRAFT_162373 CDS
T04784
Symbol
EndoIIIa
Name
(GenBank) DNA glycosylase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FRACYDRAFT_162373 (EndoIIIa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcy03400
]
FRACYDRAFT_162373 (EndoIIIa)
Enzymes [BR:
fcy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FRACYDRAFT_162373 (EndoIIIa)
DNA repair and recombination proteins [BR:
fcy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FRACYDRAFT_162373 (EndoIIIa)
Prokaryotic type
FRACYDRAFT_162373 (EndoIIIa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_8
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
OEU13889
JGI:
162373
UniProt:
A0A1E7F6Y5
LinkDB
All DBs
Position
Unknown
AA seq
217 aa
AA seq
DB search
PDGWRDTYELVRELRKDKTAPCDSAGAEALVLPPIENENDNEMYAKTRRFQTLVALMLSS
QTKDAMVDRAMGNLRATDGDDGGDGLTIASIRAMDPKVLNSKINMVGFHNNKTKYIKQVV
EILHEKYDDDIPSTADEMIRDLPGIGPKMAYIIEPICWGVSTGIGVDTHMQRLFPKIGFV
SPDVKNPEQTRKQLQSWLPHEYWGEVNLLWVGFGQEI
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
cctgatgggtggcgtgacacgtacgaattggtacgagaattacgaaaagataaaacggct
ccatgtgacagtgcgggagctgaagctttggtgttaccgccaatcgaaaacgaaaacgat
aatgaaatgtatgcgaaaacacgacgttttcaaacactcgtggccctcatgttatctagt
caaacaaaggatgcgatggtcgatcgtgcaatgggaaatctgagggctaccgatggtgat
gatggtggggatggtttaaccatcgcatccatcagagcaatggacccaaaggtattaaac
tcaaaaataaatatggtcggatttcataataataaaacaaagtacatcaagcaggttgta
gaaattctacatgaaaagtacgatgacgatataccgtcaacagcagatgagatgattcgt
gatttaccaggaattggtccgaaaatggcatatataattgaacccatatgctggggtgtt
agcacgggaattggtgtcgacacgcatatgcaacggttgtttcccaaaataggttttgtt
tcaccggacgttaaaaatccagaacaaacaaggaagcagttacaatcatggttacctcat
gaatattggggtgaagttaatctattatgggttggatttggacaggaaatt
DBGET
integrated database retrieval system
