Fragilariopsis cylindrus: FRACYDRAFT_167622
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Entry
FRACYDRAFT_167622 CDS
T04784
Name
(GenBank) putative isoleucine-tRNA ligase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FRACYDRAFT_167622
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fcy01007
]
FRACYDRAFT_167622
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fcy03016
]
FRACYDRAFT_167622
Enzymes [BR:
fcy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
FRACYDRAFT_167622
Amino acid related enzymes [BR:
fcy01007
]
Aminoacyl-tRNA synthetase
Class I (U)
FRACYDRAFT_167622
Transfer RNA biogenesis [BR:
fcy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FRACYDRAFT_167622
Prokaryotic type
Other AARSs
FRACYDRAFT_167622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
tRNA-synt_1g
Anticodon_1
tRNA-synt_1e
DUF3318
Motif
Other DBs
NCBI-ProteinID:
OEU19323
JGI:
167622
UniProt:
A0A1E7FNF5
LinkDB
All DBs
Position
Unknown
AA seq
779 aa
AA seq
DB search
MSSLPPALNFAETEEEICKQWKEQDSFRQQDKLAEERGDEEFVFFDGPPFATGLPHYGHI
LAGTIKDTVTRYAAMTGKRVERRAGWDCHGLPVEQEIDKMLNIKYREQVLEMGIDKYNTT
CRSIVSRYTKEWETTVTRLGRWIDFENDYKTMDLPFMESVWWVFSQLWEKDMVYQGFKVM
PYSTGCSTVLSNSEASQNYKDVSDPAVVVSFPIVDDDDFKGVSFIAWTTTPWTLPSNLAL
CVNPKLEYVQLLDKKSGNRYIMGKSRLCQIYPAMNKKKWKPAMAEELYEIEKTMLGAELK
GKRYQPLFDYFAGPSEYFQVLTDSYVTDDAGTGVVHQAPAFGEDDFRVCMANGVIHKGDD
SFPCPVDAGGLFTNDITIAKGVYVKDADNILIADIKERGRLVQKDSLVHSYPFCWRSETP
LIYKTVNSWFVKVEEIRDQMVDHNKNIHWVPGHVGKVRFNNWCKDARDWAISRSRFWGTP
LPIWTNEDFTECICIGSIAQLEELTGTKVTDLHREFIDHLEIPSQKNPDGPKLKRVDEVF
DCWFESGSMPYAQKHYPFENKESFEKGFPADFIAEGLDQTRGWFYSLMVLSTALFGKQAM
NNVIVNGLVLAQDGKKMSKSLKNYPDPTIVINKYGADALRMYLINSPVVRAEELKFKEAG
VLGVIKEMFLPLYNAFRFFLQNMERWESETDRKFAPSLEKVRSTTNATDIWISAATQELI
KFVHEEMAAYRLYTVLPALVSYVTQLTNWYVRLNRERLKGLEGEGSEAYEKRKQPTGPV
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctcttccaccagccttgaacttcgcggaaaccgaagaagaaatttgcaagcaa
tggaaggaacaagatagctttcgacaacaagacaagcttgccgaagaacgtggtgatgaa
gaattcgttttcttcgacggtcctccatttgcgacaggattaccacattacggtcatatt
cttgcgggtaccattaaggataccgtaactcggtatgccgccatgacaggaaaacgtgtc
gaacgacgagccggatgggattgtcacggattaccggtcgaacaagaaatcgataagatg
ctgaatattaaataccgtgaacaagtcctggaaatgggaattgacaagtacaacaccacc
tgtcggagtatcgtgagtcggtatacgaaagaatgggaaactactgttacacgattagga
cgatggatcgattttgaaaacgactataagactatggatttaccctttatggaatctgtg
tggtgggttttttcccaactttgggagaaggatatggtttaccaaggctttaaggttatg
ccatactcgactggatgttcaacggttctatctaattctgaggctagtcaaaattacaag
gacgttagtgatccagctgttgtagtgagttttcccattgttgacgatgacgactttaag
ggtgtttcgttcattgcctggacgacaacaccatggactttgccctccaacctggcgcta
tgtgtcaatcccaagttagaatatgtacaacttttggacaagaaatcaggcaaccggtac
ataatgggaaagagtcgactttgtcagatctatcccgccatgaataagaagaaatggaaa
ccagcgatggccgaggaattgtacgaaatcgaaaagaccatgctgggtgcagaacttaag
ggtaaacggtatcaaccgttgtttgattattttgctggtccctctgagtattttcaggta
cttacggattcatatgtcaccgacgatgctggtacgggagtcgtccatcaagctccagcc
ttcggtgaagatgatttccgtgtttgtatggcgaatggtgtcatccataagggcgacgat
agcttcccctgtcctgttgatgccggtggtctatttaccaatgatattaccatcgcgaaa
ggcgtttatgtaaaggacgctgataacatcttgattgccgatatcaaagagcgtggacgg
ttggtccagaaagattcgttggtgcattcctatcccttctgttggaggtccgaaactcct
ttgatttataagacagtaaactcgtggtttgttaaggtagaagaaatccgcgatcaaatg
gttgaccacaataaaaacattcattgggtaccaggccatgtcggaaaagttcgctttaac
aactggtgcaaggatgcgagagattgggccatatctcgtagtcgattttggggaactcct
ctacctatttggaccaacgaggactttaccgaatgtatctgcattggtagcattgctcaa
ttagaagaattgacgggaactaaggtaacagacctgcatcgcgagtttattgatcatttg
gaaattccatcacagaaaaatcccgatgggccaaaactgaaacgagtcgacgaagttttt
gattgttggttcgagtcgggtagcatgccgtacgcccaaaaacattacccattcgagaac
aaggaatcgtttgaaaaaggattccccgctgattttattgcggaaggtttagatcagacc
cgtggttggttttattctcttatggtcttgtcgacggcgttatttggaaaacaagccatg
aacaatgtgatcgtcaacggtcttgttctggcacaagacgggaagaaaatgtccaagagt
ctgaaaaattatcctgatccgactattgttatcaataagtacggtgcggatgctttgaga
atgtatttgattaattcacccgtcgtacgagccgaagaactgaagttcaaggaagctggt
gtcttgggtgttatcaaggaaatgttcttgcctttgtacaatgcctttcgattcttcttg
caaaatatggaacgttgggaatctgaaactgatcgcaaattcgccccctctcttgaaaag
gtcagatcaacgactaatgcaactgacatctggatttcggccgctacgcaggaacttatc
aagtttgttcacgaggaaatggcagcatatcgactgtacacagttctaccagctttggtg
tcgtacgtgacacaattaactaactggtatgtccgattgaaccgtgaacgtcttaaggga
ttagaaggggagggaagtgaagcatacgagaagcggaaacagcctacaggtcctgtatga
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