Fragilariopsis cylindrus: FRACYDRAFT_185085
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Entry
FRACYDRAFT_185085 CDS
T04784
Name
(GenBank) zf-CHY-domain-containing protein
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
FRACYDRAFT_185085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fcy04121
]
FRACYDRAFT_185085
Enzymes [BR:
fcy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
FRACYDRAFT_185085
Ubiquitin system [BR:
fcy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
FRACYDRAFT_185085
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-RING_5
zf-RING_UBOX
Prok-RING_4
zf-C3HC4_3
zf-C3HC4_2
Motif
Other DBs
NCBI-ProteinID:
OEU16314
JGI:
185085
UniProt:
A0A1E7FDU4
LinkDB
All DBs
Position
Unknown
AA seq
286 aa
AA seq
DB search
MSGGRTEVAPPPSPILPAQADSKCTHYERNCNMVAPCCNRVVGCRICHDETSPPGHPSMN
RFMVREVVCKLCGTRQMGSNQCINCKTIFGEYHCNKCNLWMSQSKKPFHCDQCGFCRVGG
QENFRHCSECCMCISVNVFDTHRCFKDKYKNNCPVCREDMFSSRQSPQDLPCGHAIHAHC
FRKLAGFDYRCPICKKTVVSQQSMAAAWEARARDISEHPMPSDLQRIVDIMCNDCETKSH
ARNWHFLGIQCGHCSSFNTVVEQVISSGPQDVPANAANDESTSGSA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtggacgtacagaagttgcaccacctccgtcaccaattctaccagcacaagcg
gatagcaagtgtactcactatgaacggaattgtaatatggttgccccatgctgcaataga
gttgtgggatgtcgtatctgtcacgacgagacaagtccaccaggacatccttcaatgaat
cgtttcatggtccgagaagtagtctgcaaattgtgtggtacaagacagatgggctcgaat
caatgcatcaactgcaaaacgatattcggagagtatcattgtaacaaatgtaatctatgg
atgagtcagtccaaaaagccattccattgcgaccaatgcggattttgtcgtgtgggtggt
caggagaacttcagacattgctcagaatgctgtatgtgtatctccgtgaatgtatttgat
acccatcggtgtttcaaggataaatataaaaataactgcccagtttgtagagaagatatg
ttctcctcacggcaatctcctcaagacttaccatgtggtcatgccatccatgcccattgc
tttcgaaaattggctggttttgactaccgttgtcctatttgtaaaaagactgttgtctct
caacaatctatggcagcagcgtgggaggctcgtgctcgagacatttccgaacatcctatg
ccaagtgacttacaacgtattgtggatattatgtgcaatgattgtgaaacaaagagtcat
gcacgtaattggcactttttaggtatccaatgtggtcattgtagttcatttaacacggta
gtggaacaggttattagttcaggaccacaggacgttccagcaaatgctgctaatgatgaa
agtacaagcgggtcggcttaa
DBGET
integrated database retrieval system
