Fragilariopsis cylindrus: FRACYDRAFT_187183
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Entry
FRACYDRAFT_187183 CDS
T04784
Name
(GenBank) snu13p-like protein
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03008
Ribosome biogenesis in eukaryotes
fcy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FRACYDRAFT_187183
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FRACYDRAFT_187183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fcy03041
]
FRACYDRAFT_187183
03009 Ribosome biogenesis [BR:
fcy03009
]
FRACYDRAFT_187183
Spliceosome [BR:
fcy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
FRACYDRAFT_187183
Ribosome biogenesis [BR:
fcy03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
FRACYDRAFT_187183
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ribosomal_L7Ae
PELOTA_1
Pico_P2B
RNase_P_pop3
Motif
Other DBs
NCBI-ProteinID:
OEU15415
JGI:
187183
UniProt:
A0A1E7FBI8
LinkDB
All DBs
Position
Unknown
AA seq
123 aa
AA seq
DB search
MSEKAFPLADADLTVALLDLIQQATNYKQTKKGANEATKTLNRGISELIIMSADAEPIEI
LLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVIACSITTNEASQLRTTIDGMKIKIEQ
LLL
NT seq
372 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaaagccttccccctagccgatgcggatttgaccgttgcattattggatctt
atccaacaagcaaccaattacaagcaaacaaagaaaggagccaacgaagctaccaagaca
ctgaatcgtggtatttcggaactcattattatgtcagctgatgctgaacctattgaaatt
cttcttcatttgccactattgtgtgaggataagaatgttccatacgtgtttgtaccaagc
aaagtagctcttggacgtgcctgtggagtttcccgtcccgttattgcttgttctatcact
actaatgaggcatctcaactcagaactaccattgatggcatgaagattaagatcgaacaa
cttttgttgtaa
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