KEGG   Fragilariopsis cylindrus: FRACYDRAFT_205339
Entry
FRACYDRAFT_205339 CDS       T04784                                 
Name
(GenBank) SNF2_N-domain-containing protein
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
fcy  Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fcy03400]
    FRACYDRAFT_205339
DNA repair and recombination proteins [BR:fcy03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    FRACYDRAFT_205339
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 SWI2_SNF2 RHH_8 TniB AAA_34
Other DBs
NCBI-ProteinID: OEU22565
JGI: 205339
UniProt: A0A1E7FWQ8
LinkDB
Position
Unknown
AA seq 631 aa
MEPLLLTIDQTEEGQVLQVPASLNRYLIPFQKEGIKFLYECLSRKSGAILGDEMGCGKTV
QIIGLLCALFNKTGTKKDLQDIPICNGEIVGENIDEWKETLSISPWHPVMIVVPPSILEV
WERAFDEFSHFSVSMYSGTIEKRTEAIKSVLYGKSDILLVPKSAFQGEDHYSKLEKVRWK
LVIIDEFHNFKNYKAKLSIHLRQLKELHQPLILGMTGTPMQNNYTELWNVVDLAQTNYLG
TREDFIRDIDRPLLRGRQKGVNPAAKKKSEAIGVHLREMLSKMMIKRTKQEVFPGDQIPQ
KTEMVVFCDLSPLQKEVYMQVLELPEFDLVKHGSRPCDCGINQDFFRQFRKLSCKAEQLE
YYRRNKSLIKNQSQCCKRLLQARKTAEAQVKGSPAYINYIKTREFAKVSLSSVVSRLPGG
GYDRTESIMDDHFSLSGKLRELARLLKKYYTERGKVLLFAHSTQTLDLIQNWLRSQPIFV
YLRMDGSTATGLRQGIADDFNRDPENFLFLLSTKAMGQGLTLNSANRVILFDVDWNPSWE
IQAQDRAHRIGQTRDVEVVRLISKGTIEEMIYLRQIYKMHLKKDALEDKKNDDSHEAPRV
FRGVQGDKHMKGELFGTENLFRFKENGSFLD
NT seq 1893 nt   +upstreamnt  +downstreamnt
atggaacctcttttactgacaatcgatcaaacggaggagggacaggttcttcaagtccca
gctagtttgaatcggtacctcattccatttcagaaggagggtattaaattcttgtatgaa
tgtttatcgagaaaaagtggggctattttaggggatgaaatgggttgcggaaagacagtc
cagattattggattgttgtgtgctctatttaacaagaccggaactaagaaagatttgcaa
gatattccgatatgtaatggggaaatagttggagagaacatcgatgaatggaaagagaca
ttatccatatcgccttggcatcctgtcatgattgttgtgcctccatcaattttggaagtt
tgggagagggcttttgatgaattttcgcatttctctgtttccatgtatagtggtacgatt
gaaaagagaacagaagccataaagagcgtactgtatggcaaatcagacattcttctggta
cccaagtcagcatttcaaggcgaggaccactacagtaagcttgaaaaggtcagatggaag
ctagtaatcattgatgaatttcataacttcaaaaattataaagctaaattatcgatacat
ctcagacaactcaaagaactacatcagcctctgatccttggtatgacgggtactccgatg
cagaataattacacagaactatggaatgttgttgatctagcgcaaacaaattatctggga
acgcgagaggactttataagagatatcgataggcctcttttgaggggaaggcaaaagggg
gtaaatccagctgcgaagaagaaaagtgaagccataggcgttcatctgagagagatgctc
agtaagatgatgattaaaaggactaagcaagaagtttttcctggcgaccaaattccccaa
aaaaccgaaatggttgttttctgtgaccttagtcccttgcaaaaggaagtatacatgcaa
gtccttgaattaccagaatttgatcttgtgaagcatggaagtaggccctgcgattgtggt
ataaatcaggatttctttagacagtttcgcaaattatcatgcaaagctgagcaactggaa
tactatcgaaggaataagagcttaatcaagaaccaatcccaatgttgtaagcgactgctt
caagcaagaaaaactgcagaagcgcaggttaaaggatctcctgcatatatcaattatata
aagacaagagaatttgcaaaggtttcactctcctctgttgtcagtcgacttcctggcggt
ggatatgaccgaactgagtcgatcatggatgaccattttagtttatcaggaaagcttaga
gaactggctagattactaaaaaagtattataccgaacgagggaaagtacttttatttgcg
cactcgacacaaaccttagacttgattcagaactggctacggagtcaaccaatttttgta
taccttagaatggatggcagtacagcaacgggattgcgacagggtattgcagacgacttt
aatagagatcccgaaaattttctattccttttgtccacaaaggcaatgggtcaagggttg
actcttaactctgccaacagggtaatcctttttgatgttgattggaatccgagctgggaa
atacaagctcaggatagggcgcaccgcatcggacaaacacgtgacgtcgaggttgtcagg
cttatctcaaaaggaactatcgaagaaatgatttatctacggcagatatataaaatgcac
ttaaagaaagatgcattggaagataaaaaaaacgatgactctcatgaggctccaagagta
ttccgaggtgttcaaggtgataaacacatgaaaggggaactgtttggaacagaaaatctc
tttcgattcaaagaaaatggtagttttctagac

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