Fragilariopsis cylindrus: FRACYDRAFT_260963
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Entry
FRACYDRAFT_260963 CDS
T04784
Symbol
PDH2
Name
(GenBank) phytoene dehydrogenase
KO
K02293
15-cis-phytoene desaturase [EC:
1.3.5.5
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy01100
Metabolic pathways
fcy01110
Biosynthesis of secondary metabolites
Brite
Enzymes [BR:
fcy01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.5 15-cis-phytoene desaturase
FRACYDRAFT_260963 (PDH2)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
Pyr_redox_2
MCRA
Pyr_redox
HI0933_like
FAD_binding_2
FAD_oxidored
FMO-like
MurD-like_N
Thi4
FAD_binding_3
2-Hacid_dh_C
KARI_N
AlaDh_PNT_C
NAD_Gly3P_dh_N
UDPG_MGDP_dh_N
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
OEU18171
JGI:
260963
UniProt:
A0A1E7FJ21
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MKLILLCHLIFALSGCHYNNNNALAFTMKMTSDGHSSSTATSNYKTSRLPTPSRIKETQN
WKEAAEMSQQFTASKTKQKKKVAIIGGGLSGLACAKYLSDAGHEAIVYEARDVLGGKVSA
WQDKDGDWIETGLHIFFGAYPNMMNLFEELNIEERLQWKEHQMTFAMQELPGKFTSFKFP
PNVPAPFNMAWAILTNTEMLTLEEKIRMVPGLAPMLIEGQSFIDKQDELSVAEFMQKYGM
PKRINEEIFIAMGKALDFTDPDKLSMSVILTAMNRFINEADGSQTAFIDGNQPDRLCQPM
VEHITARGGQVLTGKPISSIEVNPNDNSVKHLILADGSIVEADMYVSAMPVDIVKRLIPK
PWSTIPYFRQLSELEGIPVINLQIWFDTKLTSTDGLCFSRSPLLSVYADMSTCCEEYASE
TASMLELVFAPATEAVGADRNWIASSDEEIIEAALIELQRLFPTEIGPNAPDGGAQVTKS
TVVRTPRSVYATTPGRNKFRPSQESPISNFVMAGDFAAQKYLGSMEGAVLSGKIAAAVIS
DKANGKSTNGPREVHSSIRNNNGEGIEPVGVRGNYPIAFGGGQQEIGPNPSHP
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcattcttctatgtcatctcatttttgccttatctggttgtcattataacaat
aataatgcactagcttttacaatgaaaatgacgtccgacggccatagttcgtcaacagca
acatcaaattataaaaccagtcgactaccaacaccatcaaggataaaggaaacacaaaat
tggaaagaggcagcagaaatgtcacaacagtttacagcaagcaaaacgaagcaaaagaaa
aaggttgctattattggtggtggtttatctggattagcttgtgctaagtatctatccgat
gctggtcatgaagctatagtatatgaagcacgggatgtattgggtggtaaggtttctgcc
tggcaagacaaggatggggattggatcgaaacgggattacatatcttcttcggggcctac
ccaaatatgatgaatttatttgaagaattaaatattgaagaaagattacaatggaaggaa
catcaaatgacatttgcgatgcaagaactaccaggaaaattcacatcatttaaattccct
ccaaatgttcctgcaccattcaatatggcttgggctatattaacaaatacagaaatgctt
acattagaagagaagattcggatggttcctggattggctccaatgcttatagaaggtcaa
tcatttatagacaaacaagatgaacttagtgtcgctgagttcatgcagaaatatggtatg
cccaaaagaattaatgaagaaatatttatcgctatgggaaaagctctcgactttactgat
cctgataaattatcaatgtcggtgatattaacagcaatgaatcgattcatcaatgaagcg
gatggttcacagacagcatttattgatgggaatcaacctgaccgactttgtcaaccgatg
gttgaacacattaccgcacggggaggtcaggttctgacggggaaaccaatatcatcgatt
gaggttaatccaaatgataattcagtcaaacatttaattcttgcagatggcagtatagtt
gaagccgatatgtacgtatcagcaatgccggtcgatattgtgaaacgattaataccaaaa
ccttggtcaacaattccatattttagacaactttctgaattggagggaataccagtcatt
aatttgcagatttggttcgatacaaaattgaccagtacggatggactttgtttttcaaga
agtcctcttcttagcgtgtacgccgatatgtctacctgttgcgaagagtacgcatccgag
acagcttccatgctggagcttgtattcgctcccgcgactgaagcagttggtgcggatagg
aactggatcgcttcatcggacgaagaaattattgaggctgcattgatagaattacaacgc
ttatttcctaccgaaatcggtcctaacgcacctgatggcggtgcccaagtcactaaatcg
accgttgttcgaacaccccgatctgtttatgcgacaactcctggtagaaataaatttcga
ccaagtcaagaatctcctatatccaattttgttatggcaggagattttgcggcacaaaaa
tacttaggaagtatggaaggtgctgtactaagcggtaagatagcagctgcggtgataagc
gataaggccaacggaaagtcaaccaatggaccacgggaggtccattcgagcattagaaat
aataatggcgagggaatagaacctgttggagtacggggtaactaccccattgcgtttgga
ggaggtcaacaggaaataggaccaaatccgtcccatccataa
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