Fragilariopsis cylindrus: FRACYDRAFT_269912
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Entry
FRACYDRAFT_269912 CDS
T04784
Symbol
ACTIN_2
Name
(GenBank) Actin/actin-like protein
KO
K05692
actin beta/gamma 1
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03082
ATP-dependent chromatin remodeling
fcy04145
Phagocytosis
fcy04517
IgSF CAM signaling
fcy04518
Integrin signaling
fcy04519
Cadherin signaling
fcy04814
Motor proteins
fcy04820
Cytoskeleton in muscle cells
fcy05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
FRACYDRAFT_269912 (ACTIN_2)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
FRACYDRAFT_269912 (ACTIN_2)
04518 Integrin signaling
FRACYDRAFT_269912 (ACTIN_2)
04519 Cadherin signaling
FRACYDRAFT_269912 (ACTIN_2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
FRACYDRAFT_269912 (ACTIN_2)
09142 Cell motility
04814 Motor proteins
FRACYDRAFT_269912 (ACTIN_2)
04820 Cytoskeleton in muscle cells
FRACYDRAFT_269912 (ACTIN_2)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
FRACYDRAFT_269912 (ACTIN_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fcy03021
]
FRACYDRAFT_269912 (ACTIN_2)
03019 Messenger RNA biogenesis [BR:
fcy03019
]
FRACYDRAFT_269912 (ACTIN_2)
03036 Chromosome and associated proteins [BR:
fcy03036
]
FRACYDRAFT_269912 (ACTIN_2)
03029 Mitochondrial biogenesis [BR:
fcy03029
]
FRACYDRAFT_269912 (ACTIN_2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
fcy04812
]
FRACYDRAFT_269912 (ACTIN_2)
04147 Exosome [BR:
fcy04147
]
FRACYDRAFT_269912 (ACTIN_2)
Transcription machinery [BR:
fcy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
FRACYDRAFT_269912 (ACTIN_2)
Messenger RNA biogenesis [BR:
fcy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
FRACYDRAFT_269912 (ACTIN_2)
Chromosome and associated proteins [BR:
fcy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
FRACYDRAFT_269912 (ACTIN_2)
NuA4 complex
FRACYDRAFT_269912 (ACTIN_2)
Chromatin remodeling factors
BAF complex
FRACYDRAFT_269912 (ACTIN_2)
PBAF complex
FRACYDRAFT_269912 (ACTIN_2)
GBAF(ncBAF) complex
FRACYDRAFT_269912 (ACTIN_2)
SWR1 complex
FRACYDRAFT_269912 (ACTIN_2)
Mitochondrial biogenesis [BR:
fcy03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
FRACYDRAFT_269912 (ACTIN_2)
Cytoskeleton proteins [BR:
fcy04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
FRACYDRAFT_269912 (ACTIN_2)
Exosome [BR:
fcy04147
]
Exosomal proteins
Proteins found in most exosomes
FRACYDRAFT_269912 (ACTIN_2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Actin
MreB_Mbl
Motif
Other DBs
NCBI-ProteinID:
OEU13702
JGI:
269912
UniProt:
A0A1E7F6Q7
LinkDB
All DBs
Position
Unknown
AA seq
377 aa
AA seq
DB search
MSDDEDIAALVVDNGSGMCKAGFAGDDAPRSVFPSLIGRARQPGIMVGMEQRDAYVGDEA
QAKRGVLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEAHPVLLTEAPMNPKANRER
MTQIMFETFNVPAMYVNIQAVLSLYASGRTTGCVLDSGDGVSHTVPIYEGYALPHAVVRM
DLAGRDLTDYLMKILTERGYSLTTTAEREIVRDIKESLCFIAVDFEEEMKKAAESSALEK
SFELPDGNIIVIGNERFRCAEVLFQPNLTGLEMDGIADSTFQTIMKCDVDIRKDLYANIV
LSGGTTMFPGISERMSKEVTALAPASIKVKIVAPPERKYSVWIGGSILASLSTFQSMWIS
KEEYDESGPSIVHRKCF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgacgaagatattgccgcccttgtcgttgacaatggatctggaatgtgtaaa
gccggtttcgctggagatgacgccccccgttccgtctttccttccttgattggacgtgcc
cgtcaacctggtatcatggttggtatggaacaacgagatgcttatgttggggatgaagca
caagcaaagagaggtgttcttactcttaaataccccattgaacatggaattgttaccaat
tgggatgatatggaaaagatttggcatcatacattctacaatgagcttcgtgtagcccct
gaagctcatcctgttttgttgactgaagcaccaatgaatcctaaggccaacagagagcgt
atgacacaaatcatgtttgaaacattcaatgtccctgctatgtacgtgaatatccaagcc
gttctttcattgtatgcatcaggacgtaccacggggtgtgtgttggattctggagatggt
gtctcccatacagtaccaatctatgagggatatgctcttccccatgctgttgtccgtatg
gatcttgctggtcgtgatttgactgattatttgatgaagattttgactgaacgtggttat
tctttgactaccactgcagaacgtgaaattgtccgtgatatcaaggaatctctttgtttc
attgctgttgattttgaggaagaaatgaagaaggctgctgaatcatctgctttggaaaaa
tcctttgaattgcctgatggaaatatcattgttattggaaatgaacgcttccgttgtgca
gaggttcttttccaacctaacttgactggtcttgaaatggatggtattgctgatagtaca
ttccaaaccattatgaagtgtgatgttgatatccgaaaggatttgtatgccaatattgtt
ctttcaggtggtactactatgttccctggaattagtgagcgcatgtccaaggaggttact
gcattagctcctgcatctatcaaggtcaagattgttgctcctccagaacgtaaatactct
gtatggattggaggatctattcttgcatcattgtctacattccaaagtatgtggattagc
aaggaggaatatgacgaatctggtccatctatcgttcaccgtaaatgcttttaa
DBGET
integrated database retrieval system