Flavobacterium dauae: NU10_03015
Help
Entry
NU10_03015 CDS
T09251
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
fda
Flavobacterium dauae
Pathway
fda01501
beta-Lactam resistance
fda01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
fda00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NU10_03015
01503 Cationic antimicrobial peptide (CAMP) resistance
NU10_03015
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fda02000
]
NU10_03015
01504 Antimicrobial resistance genes [BR:
fda01504
]
NU10_03015
Transporters [BR:
fda02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NU10_03015
Antimicrobial resistance genes [BR:
fda01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NU10_03015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Patched
Motif
Other DBs
NCBI-ProteinID:
WLD24389
LinkDB
All DBs
Position
642828..645980
Genome browser
AA seq
1050 aa
AA seq
DB search
MFKKVIHRPVFAIVLSIVILFVGSLAIKQLPTSQFPQIAPTTVSVFIAYPGASADVLVKS
SLITLENAINGVQGMRYIATDATSAGEATLNVIFEPGTDPNDAVVLVKTRVDQVMPLLPE
LVQKEGVIVTPIQPSMLMYVNLYSKNKSMDEKFLYNYATVNIIPEINRIEGIAKAKILGS
RRYAMRVWLNPERMRAYNVSVDEVMEAIGEQSIIGRPGRIGQSSGIAAQSLEYVLTYKGQ
YNTPEEYEAIIIRANSNGESIKLKDIAKVELGSEFFDIYSNLDGDPAAAIMLKQNYGSNA
NEVIEQVKLKLEEMKQNFPPGVDYKISYDVSQFLDASIEQVIHTLRDAFILVAVVVFLFL
GDWRSTLIPIIAVPVSLIGAFFVIQLFGMSINLVTLFALVLAIGIVVDDAIVVVEAVHAK
MEEKHCSPYKAVKEVMGEISGAIIAITMVMVSVFLPISFMTGPVGTFYRQFSITMASSIV
ISAVIALTLTPVLCAILLRNNHGESKKVNLITRFIDAFNRGFDKLTGKYAGILRKIVSRK
SVTWAILLIFCAGIYVENQFLPGGFIPSEDQGTIYAIIQTPPGSTLEQTNQVARKLQEIC
KKVDGVESVSSLAGYEIMTEGRGSNAGTCLINLKSWGDREHSVTEIMEELEGKTRGLGAV
IEFFEPPAIPGFGSSGGFSMRLLDQNTTTDYHEFDKINKEFIANLNKRKELTGVFTFFAA
NYPQYELEFDNNAAMQKGVSIGKAMENLNILIGSTYEQGFIRFGQFFKVYVQSSPEFRSL
PSDILNLYVKNDSGEMVPYSSFMKLKKTQGPNEITRYNMYNSASIRGLPAPGYTTADAIQ
AINETALKTLPHGYKIAWEGLSFDEAQRGNEALYVFGVVLIFVYLVLAAQYESFILPLAV
ILSLPVGVFGSFFMLKAMGLANDIYAQVGLIMLIGLLGKNAVLIVEYAVQKRQNGATILE
AAIEAATVRFRPILMTSFAFIAGLIPLIFARGAGAIGNHTIGASALGGMLFGTIFGVLII
PGLYYIFAKLADGRKMIKNENESPLTKDLY
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaaagttatacacagaccggtatttgccattgtgctatcgatcgtaatcctc
tttgtgggatcattggcaattaaacagttgccaacctcgcagtttccgcaaattgctcct
accacagtaagcgtttttattgcttatccgggtgcaagtgccgatgtattggtaaaatcg
tcattaattactttagaaaacgccattaacggtgtgcagggaatgcggtacattgctacc
gatgccacaagtgccggcgaagcaacattgaatgttatttttgagccgggaaccgatcct
aatgatgcggttgtactggttaaaacccgggtagatcaggtgatgcctttattgcccgaa
ctggttcagaaagaaggggttattgtaacgcctattcagccaagtatgttgatgtacgtg
aacctgtacagtaaaaataaaagtatggacgaaaagtttctgtacaattacgcaactgta
aatatcattcccgaaattaatcgtatagagggtattgccaaggcaaaaattctgggaagc
cgccgttatgctatgcgtgtatggttaaaccccgaacgtatgcgtgcgtataacgtttcg
gttgatgaggtaatggaagccattggcgaacaaagtattattggacgtccgggaagaatt
ggacaaagttccggtattgccgcacagtcgttagaatacgtacttacttataaaggacaa
tacaatacgcccgaagaatacgaagcgattattatccgtgccaattcaaacggagaaagt
atcaagttaaaagatattgccaaagtagaattgggaagtgagttttttgatatttattct
aatttagatggtgacccggctgctgcgattatgctgaaacaaaattacggaagtaatgcc
aacgaagtaattgaacaagttaaactgaagctggaggaaatgaaacagaatttccctccg
ggcgttgattataaaataagttacgatgtatcgcagttcttagacgcgtctatagaacag
gtaatccacaccttgcgtgatgcgtttatccttgtagccgtagtggtattccttttcttg
ggcgattggcgttctacattaattccaattattgccgtaccggtttcgttaattggtgcc
ttctttgttatccagctttttggtatgtccattaacttggtaaccttatttgcgttggta
ttggcaattggtattgtggtcgatgatgccattgtcgtcgttgaggcggttcacgccaaa
atggaagaaaaacactgttcgccttacaaagccgttaaagaggtaatgggcgaaatcagc
ggagccattatagcaattacaatggtaatggtatccgtgtttttacccatttcgtttatg
accggacctgtaggtacattctaccgtcagttttctatcactatggcaagttcaattgta
atatcggcagtaattgctcttacgttaacaccggtattgtgtgctattttgttgagaaac
aatcacggcgagtctaaaaaggtaaatttaattacccgttttattgatgcttttaaccgt
ggtttcgataaattaacaggaaaatacgcaggtattttaagaaaaattgtcagtagaaaa
tcggtaacttgggcaattttattgattttttgtgccggaatttatgtagagaaccagttt
ttaccaggcggatttattccaagtgaagatcagggaaccatttatgccattattcaaacc
ccaccgggatcaacattagaacaaaccaatcaggtagcacgtaagttgcaagaaatctgc
aaaaaagtcgatggggtagagtcggtttcctctttggcaggatacgaaattatgaccgaa
ggtcgtggttctaatgccggaacgtgtttaattaacctgaaaagttggggagatcgcgaa
cattcggtaacagaaataatggaagaactggaagggaaaaccagaggattaggagcggtg
atcgaattttttgaaccacctgcaattcccgggtttggttcatcgggcggattttcaatg
cgtttacttgatcagaacactactaccgattaccacgaattcgataaaatcaacaaagaa
tttattgccaatttaaacaagcgaaaagagcttaccggtgtgtttactttttttgcagcc
aattatccgcagtacgagttagaatttgacaacaatgccgccatgcaaaaaggtgtttca
attggtaaggcaatggaaaatcttaatattttaattggtagtacgtacgaacaaggattt
atacgttttggacaattttttaaagtttatgtacaatcgtcgcccgaattcagaagttta
ccgtcggatattttaaatctgtatgtaaaaaatgacagcggagaaatggttccttattca
tcgtttatgaaattgaaaaaaacacagggaccaaacgaaattacgcgctataatatgtac
aattcggcatcaattcgcggacttccggcaccgggttacactactgccgatgccattcag
gctattaacgaaacagcattgaaaaccttgccgcacggttacaaaattgcttgggaaggt
ttatcgtttgacgaagctcaaagaggaaatgaagctttgtatgtatttggcgtggtgtta
atctttgtttacctggtattggcggcacaatacgaaagttttattttgccgttagccgta
attttatcattgcctgtcggtgttttcggatcattttttatgttgaaagcaatgggcttg
gcaaacgatatttacgcacaggtgggattaattatgttaattggtttgctcggtaaaaat
gcggtactgattgtagaatatgccgtgcagaaaagacaaaacggagctactattttagaa
gcggcaattgaagcagcaaccgttcgttttcgcccaattttaatgacatcatttgctttt
attgccggattgattccgcttattttcgcaagaggagcaggagccatcggtaatcacaca
atcggagcttcggcacttggcggaatgctctttggaaccattttcggagtacttattatt
ccgggattgtattacatttttgctaaactggcagatggcagaaaaatgattaaaaacgaa
aacgaaagtccattaacaaaagatctttattaa
DBGET
integrated database retrieval system
