KEGG   Flavobacterium davisii: JJC05_14240
Entry
JJC05_14240       CDS       T10287                                 
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
fdv  Flavobacterium davisii
Pathway
fdv03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:fdv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    JJC05_14240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fdv03400]
    JJC05_14240
Enzymes [BR:fdv01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     JJC05_14240
DNA repair and recombination proteins [BR:fdv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     JJC05_14240
 Prokaryotic type
     JJC05_14240
SSDB
Motif
Pfam: HhH-GPD HHH RecR_HhH
Other DBs
NCBI-ProteinID: QYS88695
LinkDB
Position
complement(2998850..2999512)
AA seq 220 aa
MNKAEKVNFVINTLNELYPTIPIPLDHKDPYTLLIAVLLSAQCTDVRVNQITPLLFAKAD
NPYDMIKLSIEEIQEIIRPCGLSPMKSKGIYGLSHILIEKHEGVVPASFDALEALPAVGH
KTASVVMSQAFGVPAFPVDTHIHRLMYRWNLSDGSSVQQTEKDAKRLFPRETWNDLHLQI
IWYGREYSPARGWRLENDIITKTIGRSSVIKEYNKKSILK
NT seq 663 nt   +upstreamnt  +downstreamnt
atgaacaaagcagaaaaagttaattttgtaattaacactcttaacgagctctatcctact
atacctattcctttagatcacaaagatccttatacactcttaatagcggttttgctttcg
gctcaatgcacagatgtaagggttaatcagattacgcctcttctttttgctaaggcggat
aatccttatgatatgattaaattaagtattgaagaaattcaggaaattattaggccttgt
ggtttatctcctatgaaatcaaaaggaatttatggattatcgcatattttaatcgaaaaa
cacgaaggagtagttcctgcttcttttgatgctttagaagctttacctgctgtaggacat
aaaacggctagtgttgttatgagtcaagcatttggagttccagcctttcctgttgacact
catattcatcgactaatgtatcgttggaatctatcagatggttcttctgtacaacaaact
gaaaaagatgctaaaagacttttccctagagaaacatggaatgatcttcatctacagatt
atatggtacggaagagaatattctcctgcaaggggctggagacttgaaaatgatattatt
acaaaaacaattggacgaagtagtgttataaaagaatataacaaaaaaagcatccttaaa
tag

DBGET integrated database retrieval system