Fictibacillus enclensis: QNH15_02255
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Entry
QNH15_02255 CDS
T09077
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
fec
Fictibacillus enclensis
Pathway
fec03030
DNA replication
fec03410
Base excision repair
fec03420
Nucleotide excision repair
fec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QNH15_02255 (ligA)
03410 Base excision repair
QNH15_02255 (ligA)
03420 Nucleotide excision repair
QNH15_02255 (ligA)
03430 Mismatch repair
QNH15_02255 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fec03032
]
QNH15_02255 (ligA)
03400 DNA repair and recombination proteins [BR:
fec03400
]
QNH15_02255 (ligA)
Enzymes [BR:
fec01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
QNH15_02255 (ligA)
DNA replication proteins [BR:
fec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QNH15_02255 (ligA)
DNA repair and recombination proteins [BR:
fec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
QNH15_02255 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QNH15_02255 (ligA)
MMR (mismatch excision repair)
DNA ligase
QNH15_02255 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QNH15_02255 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
RNA_pol_A_CTD
HHH
PTCB-BRCT
5_3_exonuc
BRCT_2
CDT1_C
HNOB
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
WHY72778
LinkDB
All DBs
Position
418728..420737
Genome browser
AA seq
669 aa
AA seq
DB search
MNEEHASQRVNELRELLETYSYEYYVLDKPTVPDSEYDRLLKELIELENNHPELRDEHSP
TVRVGGQVLDYFRKVQHKVPMLSLANAFNEEDLRDFDRRVRNGVGDNVTYVAELKIDGLA
VSLTYEQGRFVLGATRGDGTTGEDITNNLKTIRAIPLRIKDKDVSLEVRGEAYMPKRSFQ
KLNESRQEEGQELFANPRNAAAGSLRQLDPNIAGKRNLSIFVYGIGQLSGHSVDSHSESL
KFLQSLGFKTNPEWHHCQNIDEVVEFVRGWGERRPNLDYEIDGIVIKVDSLHQQEELGFT
AKSPRWAIAYKFPAEEVVTQLEGIELNVGRTGVVTPTALLSPVTVAGTTVKRASLHNEDL
IREKDIKIGDFVVVKKAGDIIPEVVNVIVDRRTGEEKDFHMPTHCPECESELERLDGEVA
LRCLNPQCPAQIREGLIHFVSRNAMNIDGLGEKVIAQLFRENLIQDVADLYTLNKEELLN
LERMGEKSVDNLLEAIEKSKENSLEKLLFGLGVRHVGAKAAKTVAQVFETMDRLMAATKE
ELIAIDEVGEKMADSIETYFNKPEVAELISELKEYGVNMEYKGPRVIRAEDVDSVFAGKT
IVLTGKLSILNRNEAKERLEALGGKVTGSVSKNTDLLIAGEDAGSKLDKAQSLGVEVWTE
QRFIEELEK
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgaagagcatgccagccaacgcgtgaatgaattacgtgagctccttgaaacatac
agttatgaatattacgtcctcgacaagccaaccgtgcccgattccgagtatgacaggctg
ctgaaggaactgattgaacttgaaaacaaccatccggagcttcgggatgagcattccccg
actgtccgggtgggaggtcaggttcttgactatttcagaaaagtgcagcacaaggtgcca
atgctcagccttgccaatgcctttaatgaagaagatttacgcgactttgaccgaagggtg
cgaaatggcgtcggcgacaatgttacttatgttgccgagctgaagatcgatggccttgct
gtgtccctgacgtatgaacaggggcgctttgtgctgggcgcgacccgcggcgatggaacg
acgggtgaagatatcacgaataacctgaaaacgattcgggccattcctctgcgcatcaag
gacaaggatgtgtcccttgaggtgcgcggggaagcttacatgccgaagcgctcctttcaa
aagctgaacgaatctcgccaggaagagggacaggagcttttcgccaatccgcggaatgca
gcagcaggctctctccgtcagctggatccaaacatagccggcaagaggaatctgtccatt
ttcgtttacggtattggtcagctttcaggccattcggttgattcccacagtgagagtctg
aaatttttgcagagccttggcttcaaaaccaatccggaatggcaccactgccaaaatatc
gatgaagtcgttgagtttgtcagaggctggggagaacggcggccgaatcttgactatgaa
attgacggcatcgttattaaggttgactctctccatcagcaggaggagcttggttttaca
gcgaaaagtccccgttgggccatcgcctacaagtttccggcagaagaggttgtcacccag
ctggaaggcattgagcttaatgtcggacggaccggtgtggttacaccgaccgctctttta
tctccggtaacggttgctggtacaaccgtcaaacgggcttcattgcataacgaagacttg
atccgcgagaaggacattaagatcggcgattttgtggttgtgaagaaagcgggagacatc
atccctgaggtcgtcaatgtgatcgttgaccgccgtaccggggaggaaaaggacttccac
atgccgacccattgtcccgaatgtgaaagcgaactggaacggctggacggagaggttgcg
ctgcgctgcctgaatccgcagtgcccggctcagatccgtgaagggctgatccactttgtt
tccagaaatgccatgaacatcgatgggcttggtgaaaaagtgattgcccagcttttcagg
gaaaatctgatccaggatgtagccgatctgtatacattgaataaggaagaactgctgaac
cttgagagaatgggtgaaaagtcggttgacaacctccttgaagctatagaaaaatcgaaa
gagaattcgctcgagaagctgttgttcggccttggcgtccgacatgtcggagcaaaagca
gccaaaacggtcgcccaggtgtttgaaacgatggaccgtttaatggcggccacgaaggaa
gaactgatcgcgattgatgaggtcggcgagaaaatggccgattccattgaaacgtatttt
aataaaccggaagttgcagagctcatctccgagctgaaggaatatggcgttaatatggaa
tataagggaccgagggtcatccgtgcggaagatgtggattcggtttttgcaggaaaaacg
atcgttctgaccggaaaactttccatcttgaaccggaacgaagcgaaagaaagactcgaa
gcgctcggcggaaaagtcaccggcagcgtttctaagaataccgacctgctaattgcgggg
gaagacgcgggctccaaactggataaagcgcaatccctaggtgtggaggtttggacggaa
cagcgatttattgaggagcttgaaaaataa
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integrated database retrieval system
