Frateuria edaphi: LQ772_16580
Help
Entry
LQ772_16580 CDS
T08888
Name
(GenBank) efflux RND transporter permease subunit
KO
K18299
multidrug efflux pump
Organism
fed
Frateuria edaphi
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fed02000
]
LQ772_16580
01504 Antimicrobial resistance genes [BR:
fed01504
]
LQ772_16580
Transporters [BR:
fed02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LQ772_16580
Antimicrobial resistance genes [BR:
fed01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
LQ772_16580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UGB45568
LinkDB
All DBs
Position
3596746..3599934
Genome browser
AA seq
1062 aa
AA seq
DB search
MKLAQYFVERPILAGVLSVLIVIAGAISLFKLPIGEYPEVVPPTVVVRATYPGANPKVIA
ATVATPLEEQINGVEGMLYTSSQATSDGAMTLTVTFALGTDLDNAQVQVQNRVAQALPRL
PEEVQRLGVTTQKSSPDLTMVVHLISPDQRYDMLYLSNYARLHIKDQLARLDGVGDVQLF
GAGEYSMRVWLDPERLAMRGLTTGDVVNAIREQNVDVAAGSLNAPPAPNGAAFQLNINTR
GRLVTEDDFANIVLRTTKDGAVTHLRDVARVELGSNNYALRSLLDNKPAVALPIFARPGS
NAIQISDEVRATMAQLKAEFPQGVDYKIVYDPTVFVRGSIEAVVHTLFEAILLVVLVVIL
FLQTWRASIIPLVAVPVSLVGTFAVMYLAGFSLNALSLFGLVLAIGIVVDDAIVVVENVE
RHIEHGLKPKEATRRAMTEVTGPIVATALVLCAVFIPAAFISGLTGEFYRQFALTIAIST
VISAFNSLTLSPALSALLLKERGAPKDRFSVLLERGFGWLFRPFNRMFVSGANRYVGGVR
RVLGKGTPALVIYGALVALGVFGFIHVPAGFVPSQDKQYLVSFAQLPDAASLDRSEDVIR
RMSEIALKTPGVESAVAFPGLSINGFTNSPNSGIVFVTLKPFEERTDPALSAGAIAGALN
QKYASIQDAYIAVFPPPPVMGLGTIGGFRIQIEDRSDQGFEELFKQTQNLIAQSQKTPAL
AGLFSSYQVSVPQIDAEVDREKAKAEGVNLADVYQTMQAYMGSLYVNDFNRFGRTYQVNV
SAEPGFRREPEDILRLKTRNAAGEAVPLGSFVQVHQGVGPDRVQHYNGYPTAEINGGPAP
GYSSGQAQAAMEKLAKDNLPNGMSFEWTELTYQQILAGNTAVLVFPLCVLLVFLVLASLY
ESLTLPLAVILIVPMVLLSAIAGVWLSGGDNNIFTQIGLIVLVGLACKNAILIVEFAREA
QIHEGLDRRTAVLEAARLRLRPILMTSFAFIMGVVPLVTSHGAGAEMRHAMGVAVFSGML
GVTFFGLLFTPLFYVIVRGWSERAAARRAARHAALPVAIEEH
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgcccaatatttcgtggagcgtccgatccttgccggcgtactgtcggtgctg
atcgtgatcgccggcgcgatctcgctgttcaagctgccgatcggcgaataccccgaagtg
gtgccgccgacggtcgtcgtgcgcgcgacctatcccggtgccaaccccaaggtcatcgcc
gccaccgtcgccacgccgctggaagaacagatcaacggcgtcgaaggcatgctttacacc
tcctcgcaggccaccagcgacggcgcgatgacgctgacggtgaccttcgcgctcggcacg
gacctggacaacgcccaggtacaggtgcagaaccgcgtggcgcaggcgctgccccggttg
cccgaggaagtgcagcggctcggcgtgaccacgcagaagagctcgccggacctgaccatg
gtcgtgcacctgatctcgcccgatcaacgctacgacatgctgtacctgtccaactacgcg
cggctgcacatcaaggaccagctcgcgcgcctcgatggcgtgggcgacgtgcaactgttc
ggtgccggcgagtactcgatgcgcgtgtggctcgacccggagcgcctggcgatgcgcggg
ctgaccaccggcgacgtggtcaacgcgatccgcgagcagaacgtggacgtggccgccggc
tcgctcaatgcgccgccggcgcccaacggggcggccttccagctcaacatcaacacccgc
ggccgactggtcaccgaggacgacttcgccaacattgtgctgcgcacgacgaaggacggc
gcggtcacgcacctgcgtgacgtggctcgcgtcgaactgggctcgaacaactacgcgctg
cgcagcctgctcgacaacaagccggcggtggcgctgccgatcttcgcccgtcccggctcc
aacgcgatccagatctccgacgaagtgcgcgccaccatggcgcagctgaaggccgagttc
ccgcagggcgtggactacaagatcgtctacgacccgaccgtgttcgtgcgcggctcgatc
gaagcggtggtgcacacgctgttcgaggcgatcctgctggtcgtgctggtggtgatcctg
ttcctgcagacctggcgcgcgtcgatcatcccgctcgtggcggtaccggtatcgctggtg
ggcaccttcgcggtgatgtacctggccggcttctcgctcaacgccttgagcctgttcggc
ctggtgctggcgatcggcatcgtggtcgatgacgcgatcgtggtagtggagaacgtcgag
cggcacatcgaacacggactgaaaccgaaggaagccacgcgccgcgcgatgaccgaggtg
accgggccgatcgtggccaccgccctggtgctgtgcgcggtgttcatcccggcggcgttc
atcagcggcctgaccggcgagttctatcgccagttcgcgctgaccatcgccatctccacc
gtgatctcggcattcaactcgctgaccctgagcccggcgctgtccgcgctgctgctgaag
gagcgcggcgcgccgaaggatcgcttcagcgtcctgctcgagcgtggtttcggctggctg
ttccggccgttcaaccggatgttcgtcagcggcgcgaaccgctacgtcggcggcgtgcgt
cgcgtgctcggcaagggcacgccggcgctggtgatctacggcgcgctggtggcgctgggc
gtgttcggcttcatccacgtgccggccggcttcgtgccctcgcaggacaagcagtacctg
gtgtcgttcgcgcagttgccggatgccgcctcgctcgaccgcagcgaggacgtgatccgc
cgcatgagcgagatcgcgctcaaaacaccgggcgtggaaagcgcggtggcgttcccgggc
ctgtcgatcaacggcttcaccaactcgcccaacagcggcatcgtgttcgtgacgctgaag
ccgttcgaggagcgcaccgatccggcgctgtccgccggggccattgccggtgcgttgaac
cagaagtacgcgtcgatccaggacgcctacatcgcggtgttcccgccaccgccggtgatg
ggcctgggcacgatcggcggcttccgcatccagatcgaggaccgctccgaccagggcttc
gaggaactgttcaagcagacccagaacctgatcgcgcagagccagaagacgccggcgctg
gccgggctgttctccagctaccaggtgagcgtgccgcagatcgacgccgaggtggaccgc
gagaaggccaaggccgagggcgtcaacctggccgacgtctaccagacgatgcaggcctac
atgggttcgctctacgtcaacgacttcaaccgcttcgggcgcacctaccaggtcaacgtc
tcggccgagccgggcttccgccgcgagccagaggacatccttcgcctgaagacgcgcaat
gccgcgggcgaagcggtgccgctgggttcgttcgtgcaggtgcaccagggcgtgggcccg
gaccgcgtgcagcactacaacggctacccgaccgccgagatcaacggcggcccggcgccc
ggctacagctcgggccaggcgcaggcggcgatggagaagctggcgaaggacaacctgccc
aacggcatgagcttcgaatggaccgagctcacctaccagcagatcctcgccggcaacacc
gccgtgctggtgttcccgctgtgcgtgctgctggtgttcctggtgctggcttcgctgtac
gagagcctgacgttgccgctggcggtgatcctgatcgtgccgatggtgctgttgtccgcg
atcgcgggcgtgtggctctcgggtggcgacaacaacatcttcacccagatcggtttgatc
gtgctggtgggcctggcctgcaagaacgccatcctgatcgtggaattcgcccgcgaggcg
cagatccatgaagggctcgatcgtcgcaccgcggtgctggaagcggcgcgtctgcgactg
cgtccgatcctgatgacgagcttcgccttcatcatgggcgtggtgccgctggtcacttcg
cacggcgccggtgcggagatgcgccatgcgatgggcgtggcggtgttctccggcatgctc
ggcgtgaccttcttcggtctgctgttcacccccctgttctacgtgatcgtgcgcggctgg
agcgagcgtgcggcggcgcggcgtgccgcgcgccacgcggcgctgcccgtcgcgatcgag
gagcattga
DBGET
integrated database retrieval system
