Ferrimonas lipolytica: HER31_04425
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Entry
HER31_04425 CDS
T06529
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
fes
Ferrimonas lipolytica
Pathway
fes03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HER31_04425 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fes03400
]
HER31_04425 (nth)
Enzymes [BR:
fes01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HER31_04425 (nth)
DNA repair and recombination proteins [BR:
fes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HER31_04425 (nth)
Prokaryotic type
HER31_04425 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
SdiA-regulated
Motif
Other DBs
NCBI-ProteinID:
QIZ76204
UniProt:
A0A6H1UAY5
LinkDB
All DBs
Position
complement(930633..931265)
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AA seq
210 aa
AA seq
DB search
MNKDKRREILVRLQEQRPNPETELEFSSPYELLVAVALSAQATDVSVNKATRVLFPVANT
PQAMLNLGVEGVKQYIKTIGLFNTKAVNVIKAAQMLVDNHHGEVPEDREALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIYRVSNRTKFAVGKTVDNVEQKLLKVVPTEFKVDVHHWLI
LHGRYTCLARKPRCGSCIIEDLCEFKDKTE
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagataaacgccgcgaaattttggtccggctgcaagaacagcgaccgaaccct
gagactgaactggaattcagctcgccttatgaactgttggtcgctgtggcgttatcagct
caagctactgatgtgtctgtaaataaagcaacacgggtgctgtttccggtggcgaatact
ccacaagcgatgttgaacttgggtgttgaaggcgttaagcaatacatcaaaaccattggt
ctgtttaataccaaggcggtcaacgtcatcaaagccgcgcagatgttggtagataatcac
catggtgaggtaccagaagatcgcgaagcgttggaggcgttacccggagttggccgaaag
accgctaacgtggtactcaatacagcctttggctggccaaccatcgccgttgatacccat
atctatcgagtttcaaatcgcaccaaatttgccgtaggcaaaactgtcgataacgtcgag
cagaagctattaaaagtggttccgactgaatttaaggtcgatgtgcatcactggttgatt
ctgcacggacgttatacctgtcttgcccgtaagcctcgctgcggctcatgtattattgaa
gacttgtgtgaatttaaagataagacagaataa
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