Formica exsecta (narrow-headed ant): 115233765
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Entry
115233765 CDS
T07422
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115233765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fex03041
]
115233765
Spliceosome [BR:
fex03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
115233765
Complex C
U5 SnRNP specific factors
115233765
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Ras
ABC_tran
Motif
Other DBs
NCBI-GeneID:
115233765
NCBI-ProteinID:
XP_029660194
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MDADLYDEFGNYIGPDLASESEDENEYGNVGDDADDRERSDEEMEEDKDESREQVEQGSS
MAVVLHEDKRYYPSALEVYGPEVETLVQEEDAQPLDKPLIAPTRKPKFQIKQQQLPETTY
SIEFLADIMDAPHLIRNIVLLGHLHHGKTTLVDCLVQQTHPYIHSITDEKPLRYTDTLFT
EQQRGVSTKATPVTLLLQDVKSKSYLLNVFDTPGHVNFSDEATAAIRLSDGAVLIVDAAE
GVMLNTERLLKHALQEKLALTVCINKIDRLVLELKLPPLDAYYKLRHIIEEINGLIALYS
SDVENPAFVSPAVGNVCFASSEYSVCFTLKSFAALYARNYPGLNPNEFAKRLWGDIYFNP
KTRKFTKKPPHNTAQRSFIEFILEPLYKIFAQVVGDVDTTLPNVLDELGIRLTSEEMKMN
IRPLLRLVCTRFLGDMCGLVDMCVAHVPSPQAHAPNKVQHVYTGPIDSPLAQDMVNCDPD
GRLMIHSTKMYPTEDCTLFVVLGRVMSGTLEAGQRVRVLGEAYSRTDEEDSRVLTVGRLW
ISEARYSIELTRVPAGNWVLIEGIDRPIVKTSTITDLNSSEDLHIFRPLKFNTQSVIKIA
VEPVNPSELPKMLDGLRKVNKSYPLLGTRVEESGEHVVLGTGELYLDCAMHDLRRMYSEI
DIKVADPVVAFAETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAEHVRITWNK
KRLGEFFQTKYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKTLLNSARDAIIQGFQ
WGTREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPY
LFVEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHT
QGQAFCLSVFHHWQIVPGDPLDKSITIRPLEPQPATHLAREFMLKTRRRKGLSEDVSINK
FFDDPMLLELARQDVLLNYPL
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgatttgtatgatgaatttggaaactatattggtcctgatctggcatcagag
agcgaggatgaaaatgaatatggcaatgttggtgatgacgccgacgacagagaacggtcc
gatgaggaaatggaggaagacaaggatgagtcacgtgaacaagtggagcaaggatcttct
atggcagttgtattacacgaagataaacgatattatccaagtgcattagaggtgtacggt
cctgaggtagaaacacttgtgcaagaagaagatgctcagccactagataaaccactgata
gcacctactagaaaaccaaagtttcaaataaagcagcaacagttgcctgaaacgacatat
agtattgaattcttagcagatataatggatgctccgcatctaattagaaatatagttttg
ctaggacatcttcatcatggcaaaactaccttggttgattgtttggtgcaacaaacgcat
ccttatatacacagtataaccgacgagaaaccattgaggtatacggatacattgttcacc
gagcaacagagaggtgtttctacgaaagcaactcccgttactcttctgctacaagatgtc
aaatccaagtcctatctcttgaacgtatttgatacaccaggccacgtgaatttttccgac
gaggcgacagctgcgatccgtttgtcagacggcgctgtactgatcgtcgatgcggcggaa
ggtgtgatgctaaacaccgaacgtctactgaagcacgcgcttcaagagaagctcgctctg
acagtctgcataaacaagatagatcgtttggtattagagttgaaactgccgccattggat
gcctattacaaactgcgtcacattatcgaggagatcaacggattgatagcattatactct
tcggatgtcgagaatcccgctttcgtttcgcctgctgtcggaaacgtgtgctttgccagt
tccgaatacagtgtatgcttcactctgaaatcgttcgccgcgctctatgccaggaattat
cccggactcaaccccaacgagttcgccaagcgactctggggtgatatttattttaatcct
aaaacgcggaaattcaccaagaaacctccgcataatacagcgcagcgaagcttcatcgag
ttcatcttggagcctctttataagatatttgcgcaagtcgtcggcgatgtcgacacgacg
ttaccaaatgttttggacgaactcggcatacgattgacatccgaagaaatgaagatgaat
atacgaccgctgctaagacttgtctgtacgcgcttcttaggagatatgtgcggattagtc
gatatgtgtgtcgctcacgtacctagtccgcaagcgcacgcacctaataaagtacaacat
gtctatactggtccgattgactcgccgctcgcgcaggatatggttaattgtgatccagat
ggaagattaatgattcacagcacaaagatgtatccaaccgaggattgcaccctgtttgta
gtgcttggcagagtaatgtccggcacactggaagcgggacaacgcgttcgagtattaggc
gaagcatattcacgcacggatgaggaggattcacgcgttctcacagtgggtagattatgg
atcagcgaagcgcgttactcgatcgaactgactcgggtgcccgcaggcaattgggttctc
atcgaaggtatcgatcggccgattgtgaaaactagtaccattacggatctcaatagttca
gaagacttgcacatctttcggccactcaaattcaacacgcagagtgtcatcaagatcgct
gtcgagccggtcaatccgtccgaattgcccaagatgttagatggtttacgaaaagtaaac
aagagctatccgctgttgggcacgcgcgtggaggaaagcggcgagcacgttgtcctggga
actggcgaactctacctcgactgcgcgatgcacgatctccgtcgcatgtattctgagatt
gatataaaagtggccgatccggtggtcgctttcgcggaaacagtagtggaaaccagttcc
ctcaaatgtttcgctgaaacgccgaataaacggaataaattgacaatgatagcggaacca
ctggagagaggtcttgccgaggatatagaggccgaacatgtccgtatcacgtggaacaaa
aagagactaggagaattttttcaaacaaaatacgattgggatttattggcagcgcgtagc
atatgggcatttggtcctgactctactgggcctaatatcctagtggacgatactttacct
tccgaagtagataaaacactattaaacagtgcacgcgatgctatcattcagggctttcag
tggggaactcgcgaaggaccattgtgcgaagagccgatccgaaatgtcaaattcaagatc
cttgatgctgtcatcgcacaggagccactgcatcgaggaggtggtcaaatcattcctacc
gctcgacgcgtcgcatattccgcttttctgatggcgacaccgcgtttaatggaaccttac
ctgttcgtcgaagtgcaagctcccgcggactgcgtgtccgctgtttacacagtcctggcc
aagcggcgaggtcacgtaacgcaagacgccccggtgccgggtagtccgttgtacacgatc
aaagccttcataccagccatcgacagttttggttttgagacggatttacggacgcatacc
caaggtcaagcgttttgcctttccgtctttcaccattggcaaatcgttcccggtgatcct
ctggacaaaagcataactatcagaccgctggagccgcaaccggctacccatctggctaga
gagttcatgctgaagacgcgaagacgcaagggtctgtccgaagatgtttccatcaacaag
ttcttcgacgatcctatgttgctggagttggctcggcaggatgtactgttgaattatccc
ctttaa
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