Fusarium falciforme: NCS54_00077200
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Entry
NCS54_00077200 CDS
T09198
Name
(RefSeq) Sm domain-containing protein
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
ffc
Fusarium falciforme
Pathway
ffc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCS54_00077200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffc03019
]
NCS54_00077200
03041 Spliceosome [BR:
ffc03041
]
NCS54_00077200
03032 DNA replication proteins [BR:
ffc03032
]
NCS54_00077200
Messenger RNA biogenesis [BR:
ffc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
NCS54_00077200
Spliceosome [BR:
ffc03041
]
Complex A
U1 snRNP components
Sm proteins
NCS54_00077200
U2 snRNP components
NCS54_00077200
Complex B
U1 snRNP components
NCS54_00077200
U4/U6.U5 tri-snRNP components
NCS54_00077200
Complex C
U2 snRNP components
NCS54_00077200
DNA replication proteins [BR:
ffc03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
NCS54_00077200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Eap1
Motif
Other DBs
NCBI-GeneID:
77786721
NCBI-ProteinID:
XP_053002386
LinkDB
All DBs
Position
1:join(2833052..2833075,2833149..2833157,2833241..2833312,2833365..2833670,2833729..2833813,2833865..2833998)
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AA seq
209 aa
AA seq
DB search
MSNKQGKMAGYINWRMRVTLNDGRAMTGQMLAFDKHMNLVLADTEEFRRVKRKQNKPAAP
GASGSATQTIESEEKRTLGLTIVRGAHIISLSVESPPPADPSARLGKSAPGGISSALAAG
PGVARPAGRGAAPPSLAGPAAGVGGAPPPGFPGFPGGPGFPGGRGAPPPGFPGNFPPPPA
GFPGNPQFPPPGFNPGGPPPPGFQPSSRR
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacaagcaaggaaagatggccggttacattaactggcggatgcgggttaccctc
aacgatggcagggcaatgaccggtcagatgcttgcctttgacaagcacatgaacctcgtc
ctcgccgacactgaagagttccgacgcgtcaagcgcaagcagaacaagccagctgcccct
ggcgcgagtggttccgcgacacaaaccatcgagtcggaggagaagcgaactctgggtctc
acgatcgtccgaggcgctcacatcatctccctctccgtcgagtcgcctccccccgccgac
cctagcgctcgacttggaaagagtgcccctggtggaatctcttctgccctggcggctggt
cctggagtcgctcgccctgctggcagaggagctgcccctccttctttggccggccctgct
gccggcgtcggtggtgctccccctcctggcttccctggcttccccggtggccctggattc
ccaggtggtcgaggtgcgccccctcctggcttccctggaaacttccctccccctccagct
ggattccctggaaaccctcagttcccgcctcccggcttcaaccctggcggtccccctcct
cctgggttccagccctcttcgagaagatag
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integrated database retrieval system
