Fusarium falciforme: NCS54_01136400
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Entry
NCS54_01136400 CDS
T09198
Name
(RefSeq) Hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
ffc
Fusarium falciforme
Pathway
ffc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCS54_01136400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffc03019
]
NCS54_01136400
Messenger RNA biogenesis [BR:
ffc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
NCS54_01136400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_15
AAA_23
DUF3584
PduV-EutP
AAA_22
AAA_25
SRP54
AAA
AAA_28
Arf
AAA_16
AAA_14
RsgA_GTPase
ORC-CDC6-like
nSTAND3
AAA_13
Roc
NACHT
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
77797313
NCBI-ProteinID:
XP_053012618
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Position
9:1549538..1550401
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AA seq
287 aa
AA seq
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MTVPPKPPRILVNDLSYTFPDYSTGIKNITLDLPPRSRTLLIGANGAGKTTLLRLLAGKR
LSPSNTISICGVDPFKESLEGVTYLGLEWVLNPIVRNDIGVNELLRSVGGDAYPERRDEL
VAMLDVDTNWRMHAVSDGERRRVQLAMGLVRPWTILLLDEITVDLDVLSRAEFLGWLKRE
TEIRECTIVYATHILDNLAGWPSHLVHMHLGTVKEWDEADKMLSTIDGTVGASGNSRLGE
LVLSWLRDDRTERGPRSHAKRAPEGKTYGFGGIQIGGYGDESKQREV
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgactgttccccccaagcctcctcgcatcctggtcaacgacctctcgtacacattccct
gactactcaaccggcatcaagaacattaccctcgatctgcctccgcgctcacgcactctt
ctgatcggtgccaacggcgctggaaagacgaccctccttcgcctgctcgccggcaagcgt
ctctcgcccagcaacaccatctccatctgtggagttgatcccttcaaggagagtctcgag
ggtgtcacttatctcggcctcgaatgggtcctcaaccccattgttcgcaatgatattggt
gtcaatgagcttctccgctccgtcggtggcgatgcttaccccgagcgtcgagatgagctc
gtagctatgctcgatgttgacaccaactggcgcatgcacgccgtttctgacggcgagcgt
cgtcgcgttcagcttgccatgggtctcgtgcgaccctggactatcctcttgctcgacgag
atcaccgtcgatcttgacgtcctcagccgcgccgagttccttggctggctcaagcgtgag
accgagatccgagagtgcaccatcgtctacgctactcacattctcgacaacctcgccggt
tggcccagtcacctcgtccacatgcaccttggcacagtcaaggaatgggatgaggctgac
aagatgctctccaccattgacggcactgtgggcgcttccggcaacagccgcctgggtgag
cttgtcctgagctggctgcgagatgatcgaacggagcgaggtccccgcagccatgcgaag
cgcgcacctgagggtaagacgtacggcttcggcggtatccagatcggcggctacggtgac
gagtccaagcagcgcgaggtctag
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