Fodinisporobacter ferrooxydans: LSG31_04420
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Entry
LSG31_04420 CDS
T10129
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ffe Fodinisporobacter ferrooxydans
Pathway
ffe01501
beta-Lactam resistance
ffe01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ffe00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LSG31_04420
01503 Cationic antimicrobial peptide (CAMP) resistance
LSG31_04420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ffe03036
]
LSG31_04420
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ffe02000
]
LSG31_04420
01504 Antimicrobial resistance genes [BR:
ffe01504
]
LSG31_04420
Chromosome and associated proteins [BR:
ffe03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LSG31_04420
Transporters [BR:
ffe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LSG31_04420
Antimicrobial resistance genes [BR:
ffe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LSG31_04420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
HH_MFP_RND
HH_CzcB
Beta-barrel_RND_2
RND-MFP_C
CzcB_C
HH_AprE
BSH_YknX
BSH_RND
Beta-barrel_AAEA
HH_YBHG
DUF2959
YkyA
GAS
GpP-like_1st
DUF7189
HH_EMRA
Permu_RdRp_thumb
Beta-barrel_RND_rel
TACC_C
TPR_MLP1_2
CCDC39
Nuf2_DHR10-like
SOAR
AAA_13
Motif
Other DBs
NCBI-ProteinID:
UOF91503
UniProt:
A0ABY4CQL8
LinkDB
All DBs
Position
complement(942859..944157)
Genome browser
AA seq
432 aa
AA seq
DB search
MKWKKIIFFLVLPVSAFILILGGFFTHKIRPGNVQLEMKEVKGVKLLKIQGNQYQSTLSV
PGTVVSQENTTISSKIMATVKNILVKKGQIIHKGEPLLLLDSSQVAATADQAKAGIAVAQ
ATQQTVDQSIKVAQSAADQVHTQIQQANAALQAAQAQFTNAKTNFDRISGLLAAGAASQQ
DYDNAKTNYTSAQAAVDKATANVDSAEAAYKQALQSVAAAKSRIGETDAQIQQAGAAYAS
ASISQSDATILAPFDGKFIDTLVNIGDMASPGLPLVKVEKPPYYLEVYLDESKQNNIHLG
DKIPVTIGTDKKTLTGTVAEIVPHVDPNTRKFKVKILLPSSQDIVSGMYGEAAVPDGSEK
GMFVPESAIVRWSQFTGVFVVDDKDITHLRYVNLGRSQNGNVEVLSGLNVGDKVVISPVD
KITDQEKVVPAS
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggaaaaaaatcatattctttttggtgcttcctgtttcggcatttatacttata
cttggcggttttttcacacataaaattcgtccgggcaatgtacagcttgagatgaaagaa
gtaaaaggtgtcaaactcctgaaaatacaaggaaatcagtatcagtcgactttgagtgtg
cctggtactgtggtttcacaggagaatacgacaatttccagcaaaatcatggctactgta
aaaaatatactggtcaaaaaggggcaaatcattcacaagggagagccattgctactgctg
gattcatcccaggttgcagcaactgcagaccaggcaaaagccggtatcgccgttgcacag
gcaacccagcaaacggttgatcaatcgattaaggttgcccaatcggctgcagatcaggta
catacacaaatccaacaggcaaatgctgccttgcaagccgcacaggcccaattcaccaat
gcaaagacaaatttcgaccgcatatccggtcttttggcagcgggtgcagccagccaacaa
gactatgacaatgccaaaaccaattacacaagcgcgcaggctgccgtagataaagccacg
gccaatgtcgattctgccgaggccgcttataagcaggcgttgcagtctgttgctgctgcg
aaaagcaggattggcgagacagatgcacaaatccagcaagcaggagccgcgtatgccagt
gcgtccatttcgcaaagcgatgccacgatacttgcaccgtttgacgggaaatttattgat
accctcgttaatataggagacatggcttccccaggcctgccgctggtaaaagtggagaag
cctccctattatcttgaggtttatctggatgaaagcaaacaaaacaatattcatcttggc
gataaaattcctgtcacaattggcacggataaaaaaactttgacaggcaccgtggcggaa
atcgttccgcacgtagatcccaatacacgcaaatttaaagtgaaaattttacttccatca
tcacaagatatcgtcagtggaatgtatggagaagcagctgttcccgatggaagcgagaaa
ggaatgttcgttcctgaatcggcgatcgtgcgctggtcacaatttaccggtgtctttgtg
gttgatgacaaggacattacccatttgcgctatgtcaatcttggccgctcacaaaacggc
aatgtggaagtgttgagcggactcaatgtcggagacaaagttgtcatcagcccggtcgat
aaaatcaccgatcaggaaaaggtggtgcctgcatcatga
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