Fulvia fulva: CLAFUR5_02748
Help
Entry
CLAFUR5_02748 CDS
T08195
Name
(RefSeq) putative U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
ffu
Fulvia fulva
Pathway
ffu03018
RNA degradation
ffu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CLAFUR5_02748
09123 Folding, sorting and degradation
03018 RNA degradation
CLAFUR5_02748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffu03019
]
CLAFUR5_02748
03041 Spliceosome [BR:
ffu03041
]
CLAFUR5_02748
Messenger RNA biogenesis [BR:
ffu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CLAFUR5_02748
mRNA degradation factors
5'-3' decay
Lsm complex
CLAFUR5_02748
Spliceosome [BR:
ffu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
CLAFUR5_02748
Complex C
U2 snRNP components
CLAFUR5_02748
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
71982626
NCBI-ProteinID:
XP_047757438
LinkDB
All DBs
Position
2:join(1638386..1638511,1638565..1638691,1638746..1638780)
Genome browser
AA seq
95 aa
AA seq
DB search
MAEPEDAGANPVNEPLDLVRLSLNEIVFVKLRGDRELQGRLHAYDSHCNLVLGDVSETVY
VVDEEDEQENVRTVKKQSEMLFVRGDSVVLISPQQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atggccgagccagaggatgcaggagccaacccggtgaatgagccactcgacctagtgcgc
ctatcactcaacgagattgtgtttgtgaagctcagaggagacagagagttgcagggcagg
ctacacgcgtacgacagtcactgcaacttggtccttggcgatgtttcggagacggtatac
gtggtagacgaggaggatgagcaagagaacgtgaggacggtgaagaaacagtcggagatg
ctgtttgtgagaggcgacagcgtcgtcctgatatcgccacagcaatag
DBGET
integrated database retrieval system
