Fulvia fulva: CLAFUR5_08627
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Entry
CLAFUR5_08627 CDS
T08195
Name
(RefSeq) U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
ffu
Fulvia fulva
Pathway
ffu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CLAFUR5_08627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ffu03041
]
CLAFUR5_08627
Spliceosome [BR:
ffu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
CLAFUR5_08627
Complex C
U5 SnRNP specific factors
CLAFUR5_08627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
EFG_III
MMR_HSR1
FeoB_N
EFL1
SRPRB
Motif
Other DBs
NCBI-GeneID:
71988505
NCBI-ProteinID:
XP_047760010
UniProt:
A0A9Q8P726
LinkDB
All DBs
Position
3:5503938..5506910
Genome browser
AA seq
990 aa
AA seq
DB search
MDDLYDEFGNFIGEPEEHSQEEETTTTAYDGAQYLHDDESQAGAAAPTGQEMMDRDDEGP
SNAVVLHEDKQYYPSAPQIYGPGVETLVQEEDTQALQQPIIAPVEHKNFTVEEDDLPPVY
FDRGFMADLMSFPEQIRNIAFCGHLHHGKTSFMDALVNQTHDTSTFWQGKTGKARDELMR
YTDTHILERERGLSVKASPMSLMLQGTRGRSHLVNIIDTPGHVNFADELAASLRLADGVV
LVVDVVEGVQVQTELAIKHAVLDGLPLVLLINKMDRLMLELKLPPTDAYFKLKHVVEDVN
THIENTIPGQGEKFRVSPEKGNVAFACSSMEWSFTLPSFARIYAESYPSPEFDVTEFSKR
LWGDIYFNPGSSKFTRKAVEERAKRSFVHFVLEPIYKLYSSTLSESPEDLGKTLHGLGIS
LKPSQLKANAKDLLKLVCQQFFGPAAGFVDMVVQHIPSPVAGAKQKLGNYYTGPLDSKTA
MSMLDCDPDGPLVIHVSKLLTTQDAKGFHSFGRVMSGTAKPGQQVRVLGESYSIDDDEDM
VNATIESVAIAESRYNVPVSGMPAGNFVLLSGVDNSIVKTATIVSPNLPDDEAAYIFRPI
VHFFESVFKVAVEPINPSELPKMLDGLRKINKSYPLITTKVEESGEHVVLGTGELYMDCV
LHDLRRLYAQMEIKVSDPVTRFCETCVDQSAMKCYALTPNKKNKLTFVAEPLDDGIAQDI
ESGKVSIKDPVRKVGKFFEDNYGYDILASRNIWAFGPDDSSPNILQNDTLPSDVDQKLLR
SVKDTIRQGFAWGTREGPLCEEPIRNVKFKITDVELASEAIFRGGGQIIPTARRACYSSF
LMAGPRLMEPMYSCNMLGPATAVSSLYTVLARRRGHVLSDAPVPGTPLYSVKGLIPVIDS
FGFETDLRIHTQGQATVSLVFDRWNIVPGDPLDKSIKLRPLEPASAQATARDFVLKTRRR
KGLSEDVTVSKYVEPEIMRQLKETGMLDGA
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctctacgacgagtttggcaacttcatcggcgagcccgaggagcacagccag
gaggaggagacgacgacgacggcatacgatggcgcgcaatatctgcacgacgatgagtcg
caagcaggtgccgccgcgcccaccggccaggagatgatggacagagacgatgaaggcccg
tcgaatgctgtggtgctgcacgaggacaagcagtactacccctccgccccacagatatac
ggccccggggtcgaaacactggtgcaagaggaggacactcaggctctgcaacagcccatt
attgcgcctgtcgaacacaagaacttcacggtcgaggaggacgacctgccacccgtctac
tttgatcgcggcttcatggccgatttgatgagctttccggagcaaatacgaaacattgca
ttctgcggacatctccaccatggcaagaccagcttcatggacgcattggtcaatcagact
cacgacacatccacgttctggcagggcaagactggcaaagcgcgggacgagctgatgagg
tataccgacacacacattctggaacgggaacgaggactgtcggtcaaggccagcccgatg
agtttgatgctacaaggcacacgaggaaggagccatctggtcaacattatcgacactcct
ggccatgtcaacttcgccgacgagcttgctgcttcgctgcgactagccgacggtgttgta
ctggtagtcgacgtggtggagggtgtgcaagtccagactgagcttgccatcaagcacgct
gtgcttgatggactaccgctcgtgctcctcatcaacaagatggatcgactcatgctcgaa
ctgaagctgccacctaccgatgcatacttcaagctcaagcatgtagtggaagacgtcaac
acccacattgagaacacgatccctggccaaggcgagaagttccgcgtcagtcccgagaag
ggcaacgttgcgttcgcttgcagcagtatggaatggtctttcaccttgccatcgttcgcg
cgaatctacgcggaaagctaccccagcccagagttcgatgtgaccgagttcagtaagcgg
ctatggggcgacatctacttcaaccctggttcgagcaagttcacccgaaaggctgtggag
gagcgtgcaaagaggagttttgtacacttcgtgctggagcccatctacaagctttattcg
agtacattgtcagagtcgcctgaagatctcggaaaaacactgcatggtctcggcatatcg
ctcaagcccagtcagctcaaggccaatgcaaaggacctattgaagctggtatgccaacaa
ttcttcggcccggccgcaggatttgtcgacatggtggtgcagcacattccatcgcctgta
gcaggtgcgaagcagaagctggggaattactatactggccctctcgactcgaagacagcc
atgtcgatgctagattgcgacccagacggaccacttgtcatccacgtttccaagcttctc
acaacacaagacgccaagggcttccactcttttggtcgtgttatgtctggaacagcgaag
cctggtcagcaagtcagagtgctcggcgaaagctacagcatagacgacgatgaagacatg
gtaaacgcgactatcgagagcgttgctatcgccgagagccgctacaatgtacctgtgtct
ggcatgcctgcaggcaactttgtgcttctcagcggcgttgacaactcgatcgtgaagacg
gcgacaatcgtgtcaccaaacctgccggacgacgaagctgcgtacatcttcaggcccatt
gttcacttcttcgagagtgtgttcaaggtggcggtcgaaccgatcaatccctccgaattg
ccgaagatgcttgacggtctccgcaaaatcaacaaatcatatccactcatcacgacgaag
gtcgaagaaagtggtgagcacgttgttctcggtactggtgagctatacatggactgcgtg
ctccacgatttgcgcagactttacgcacaaatggagatcaaggtctctgatcccgtgacg
agattctgcgagacttgcgtggaccaaagtgctatgaagtgctatgctctcacacccaac
aagaagaacaagctgacatttgtcgcggaacctcttgatgatggcatcgcgcaagatatt
gaatctggcaaagtcagcatcaaggaccctgttcgcaaagtcggcaagttcttcgaagac
aactacggctacgacatcctcgctagccgaaatatctgggctttcggaccggacgactcg
agtccgaatatcctacaaaacgacacgctaccatctgacgtcgaccagaagctgctgcga
agtgtcaaggacaccatccgacaaggtttcgcgtggggtacgcgagaaggaccactctgc
gaggagcccatccggaatgtcaagttcaagatcacggacgttgagctggcatccgaggca
atcttccgaggtggtggccagatcattccgaccgcacgacgagcatgctacagctctttc
ctcatggctggaccaagactgatggagccaatgtacagttgtaacatgctcggacccgcc
accgccgtatcatcactatacacagtcctcgcacgacgaagaggtcacgtcctaagcgat
gcgcccgtgcctggcacaccactttactccgtcaagggtctgattcccgtcattgacagt
ttcggcttcgagacagatctgaggatccacacacaaggacaagccaccgtctcgttggtc
ttcgaccgatggaatatcgtgccgggagacccgctcgacaagtccatcaagctgagacca
ctagagccagcctccgcacaagcaacagccagagacttcgttctcaagacgcggaggaga
aagggtctcagcgaagacgtcacagttagcaaatacgtcgagcccgaaattatgaggcaa
ttgaaggagacgggcatgttggatggtgcatga
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integrated database retrieval system
