Flavobacterium flavipigmentatum: LNP22_06220
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Entry
LNP22_06220 CDS
T10330
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ffv Flavobacterium flavipigmentatum
Pathway
ffv01501
beta-Lactam resistance
ffv01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ffv00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LNP22_06220
01503 Cationic antimicrobial peptide (CAMP) resistance
LNP22_06220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ffv02000
]
LNP22_06220
01504 Antimicrobial resistance genes [BR:
ffv01504
]
LNP22_06220
Transporters [BR:
ffv02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LNP22_06220
Antimicrobial resistance genes [BR:
ffv01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LNP22_06220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
UFH39869
LinkDB
All DBs
Position
complement(1340636..1343812)
Genome browser
AA seq
1058 aa
AA seq
DB search
MKLAEISIKRPSLVIVLFTILTLGGLFSYSQLGYELIPKFEQNVITISTIYPGASPSEVE
NTVTKKIEDAIASLENIKKIDSKSYESLSIVSITLTSTAKVDISMNDAQRKINAIISDLP
DDAETPSLTKFSLSDLPIMTIGANGKMDEAAFYDLIDKKIAPVLSRVTGVAQVNIIGGQE
REIQVNLDALKMQGYGLSIPQVQQNILSSNLDFPTGNIQTRDQKILIRLAGKYKSVEELR
NLVVSSQNGIQIRLGDIADVQDTQKIAEKISRVDQKSAIVLQIIKQSDANAVAVSEQLLK
TIETLEKDYKANKLELEVAKDSTIFTLEAADSVVHDLLIAVILVAFVMLFFLHSIRNSLI
VMVSIPASLIATFIGIYLMGYTLNLMSLLGLSLVVGILVDDAIVVLENIYRHMEMGKSRI
RASYDGTAEIGGTVTSITLVIVVVFLPIAMSSGLVSNIITQFCVTVIISTMLSLLASFTI
IPWLSSRYGKLEHIEGKNLFGRIILGFESYLTRFTNWISGLLEWSLDHYIKTIVIVLVLF
FGSIFSLLGGGFIGGEFFASSDSGEFLVQIEMPKDASLEQTNFMTQKAEAFLKTQEYVHS
QITTVGQTSEGLGASQATAYKAEIDVKMIEQKDRDDDASVYAAKIKRKLEKILVGAKVKT
VPVGILGTADNATLGLIVTGPSTESAMAYAKLAEAELRKIPGTTEIKLTVEDGNPEINVQ
VDRDKMAALGLTLQTVGLTMQTAYSGNTDGKYRAGEYEYDINIKYNAFDRKNITDVSNLI
FINAAGQQIKLSQFATIKEGSGPSQLERRDKTASVTVQGQNVGVPSGTIVTQWQEKLDKL
EKPVGVNYIWGGDQENQSEGFGTLGIALLAAIVLVYLVMVGLYDSFAHPFVVLFAIPLSF
IGVLLALALTNNTLNIFTILGVIMLIGLVCKNAIMLVDYTNQRRAAGESIRTALIQANHA
RLRPILMTTIAMVFGMFPIALASGAGAEWKNGLAWVIIGGLISSLFLTLIVVPVIYSIME
KIIHKFSKGEKIDYEAEMVADYEHIELSEDGFNPKHTH
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagccgaaatatccataaaacgtccgtcgttggtaattgtattgtttacaatt
ctaacacttggtggattattcagttacagccaattaggctacgagctgatccctaaattt
gagcaaaacgttatcacaatttctactatttatccaggagcttctccgagtgaggtagag
aacactgtaaccaagaaaattgaagatgcaatcgcatctctggaaaacatcaagaaaatt
gactcaaagtcctacgaaagtttgtctatcgtatcgattacactgacttctactgccaaa
gtcgatatctctatgaatgatgcgcagcgaaaaataaatgccatcataagtgatttaccc
gatgatgccgaaactccatcgctgaccaaattctccttgagcgatttaccaattatgaca
attggtgccaacggaaagatggatgaagctgcattttatgatttaattgataaaaaaatc
gcacctgttttatctcgtgtaactggagttgcgcaagtaaatattattggtggacaggaa
cgtgaaattcaggtaaatcttgatgcattaaaaatgcagggttacgggctttcaatccca
caggtacaacaaaacatcctgtcatccaacttagatttcccaacaggaaatattcaaact
cgtgatcagaaaatattaattcgtttagcgggtaaatataaaagtgttgaagaattaaga
aatttagtggtttcttctcaaaacggaattcagattcgtttaggagatattgcagacgtt
caggatacacaaaaaattgctgaaaaaatatcgcgtgtcgatcaaaaaagcgcgattgtt
ttacaaattatcaaacaatctgatgccaatgctgtggcagtaagtgagcaattattaaaa
acaattgaaactcttgaaaaagattataaagcaaataaactagaattagaagtcgcaaaa
gacagtactatttttacgttggaagctgctgattctgtagttcatgatttattaatagcc
gtaattttggtggcttttgtaatgttgttcttcctgcacagtataagaaactcattgatt
gtaatggtttcgataccagcatctttgattgctacttttatcggaatttatttaatggga
tacaccctaaacttaatgagtttattaggattatctctggtggtcggtattctggtcgat
gatgcgattgtggtacttgaaaacatctaccgacacatggagatgggtaaaagccgtatt
cgagcatcgtatgatggaactgcagaaattggcggaaccgtaacttcgattacattggtt
attgtggtcgtgttcttgcctattgcaatgagttctggtttggtttctaatattattaca
caattttgtgtaacggtaattatttcaaccatgttatcacttttggcttcatttactatt
attccttggttgtcttctcgttatggaaaattagaacatattgaaggaaaaaatcttttt
ggaagaattattcttggtttcgaaagttatttgacacgttttacaaactggatctctggt
ttattagaatggagtttagatcattacatcaaaacaattgtgattgttttagtattattt
tttggatcaatcttctctttactaggcggcggatttatcggtggtgaattctttgcttct
tcagacagtggtgagtttttagttcaaatcgaaatgccaaaagatgcttcgttggagcaa
accaactttatgacacaaaaagcagaagcctttttgaaaactcaggaatatgttcacagc
cagattacaactgtaggacaaactagtgaaggtcttggagcctcacaagccacggcgtac
aaagctgagattgatgtaaaaatgatcgaacagaaagatcgtgatgatgatgcttcggtg
tatgctgcaaaaatcaaacgtaaacttgaaaaaatattggttggagcaaaagtaaaaaca
gttccggttggtattttaggtacggcagataatgctactttaggattaattgtaacaggt
ccatcaactgaaagcgccatggcatacgctaaattagcagaagctgaattgcgcaaaatt
cctggaacaacagagattaaactaactgttgaagacggaaatcctgaaattaatgttcag
gttgaccgtgataaaatggctgctttaggtctgactcttcaaacagtaggtctcaccatg
cagactgcctacagtggaaatacggatggtaaatacagagctggtgaatacgaatacgac
atcaatattaagtacaatgcttttgacagaaaaaacattaccgatgttagtaatctaatt
tttattaatgccgcaggacagcaaatcaaattatctcaatttgctaccattaaagaaggt
tctggacctagccaattagagcgtagagacaaaacagcttcggtaacagtgcaaggtcaa
aatgttggggttccttccggaacaattgtaacgcaatggcaggagaaattagataaactt
gaaaaaccagttggggtaaactacatctggggtggtgatcaggaaaaccaaagtgaaggt
tttggtacattaggaatcgctttgttggccgctattgttttggtttaccttgttatggtg
ggactttatgatagttttgcacacccgtttgtggtattatttgctattccgctttcgttt
atcggggtattattagctttggctttgaccaacaacaccttaaatatatttacgattctt
ggggttatcatgttgattggtctggtgtgtaaaaacgcgatcatgcttgtcgattatacc
aaccagcgaagagcggctggagaatctatcagaacggcattgattcaggcaaatcacgca
cgtttacgtccgattttgatgactacaattgcgatggtatttggtatgtttccaattgca
ttggcatctggagcgggagctgaatggaaaaacggattggcttgggtaattatcggaggt
ttgatctcttctttattccttactttgatcgtggttcctgtgatttatagtatcatggaa
aaaatcatccacaagtttagtaaaggagaaaaaattgattatgaagctgaaatggttgcc
gattatgagcatatcgaactaagcgaagacggttttaacccgaaacacacccattaa
DBGET
integrated database retrieval system
