Flavobacterium flavipigmentatum: LNP22_08725
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Entry
LNP22_08725 CDS
T10330
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ffv Flavobacterium flavipigmentatum
Pathway
ffv00300
Lysine biosynthesis
ffv00550
Peptidoglycan biosynthesis
ffv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ffv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LNP22_08725
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LNP22_08725
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ffv01011
]
LNP22_08725
Enzymes [BR:
ffv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
LNP22_08725
Peptidoglycan biosynthesis and degradation proteins [BR:
ffv01011
]
Precursor biosynthesis
Amino acid ligase
LNP22_08725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
DUF3440
CbiA
Ribosomal_S2
Intein_splicing
Motif
Other DBs
NCBI-ProteinID:
UFH40346
LinkDB
All DBs
Position
1926997..1928460
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AA seq
487 aa
AA seq
DB search
MKILKDILYKVAIESVTGSTDIAIHKIDFDSRKIEENDLFVAIRGSLSDGHDFIEKAIQL
GATAIICDTLPEKLEKGITYIKVQDTNAALAFMAANFFENPSEKLKLVGVTGTNGKTTIA
SLLFQLFENAGFKVGLLSTVKIMVDKIEYKATHTTPDSITINYYLNEMVKAGVTHCFMEV
SSHGIHQKRTEALHFVGGIFTNLSHDHLDYHPTFAEYRDVKKSFFDSLPKTAFALSNSDD
KNGAVMLQNTVARKRTYALKTYADFKAIILESQMSGLLLKVNENEVWVKLIGTFNAYNVL
AIYGTAIELGMDSLEALRLLSDLESVSGRFQYIISESNITAIVDYAHTPDALENVLKTIE
DVRTKNEQLITVVGCGGNRDKTKRPIMSKIATDLSDKAILTSDNPRNENPEVILDEMEMG
VEPQNYKKMLRITDRKQAIKTACQLAQSNDIILIAGKGHETYQEVNGVRHHFDDMETVKE
ILEQLGK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatattaaaagacatattatataaagtagctatcgaatctgtaacgggttcgacg
gatattgccattcataaaattgattttgattcgagaaaaatagaagaaaacgatcttttt
gttgccattcgcggatcactttctgatgggcatgattttatcgaaaaagcgattcagtta
ggtgcaactgcgattatttgcgatactttgccggaaaaattagaaaaaggaattacctat
ataaaagtacaagataccaatgctgcattggcttttatggcggctaatttttttgaaaat
ccttctgaaaagttaaaattggtaggtgtaacggggacaaacggaaagacaactattgcg
tcattattgtttcaattgtttgaaaacgctggttttaaagttggtttgctgtcaactgta
aaaatcatggtcgataagatagaatataaagcgacacatactacgccggattctattacg
atcaattattatttgaatgaaatggtcaaagctggcgtaacacattgttttatggaagtg
agttcacacgggattcatcaaaaaagaacagaagcgttgcattttgttggcgggattttt
acaaatctgtcgcatgaccatttagattaccatcccacatttgcagaatacagagatgta
aaaaaatcattttttgattcgttgcctaaaactgcttttgcgttatcgaatagtgatgat
aaaaatggagcggtaatgttgcaaaatactgtagccagaaaacgtacgtatgcgcttaaa
acctatgcagattttaaagccattattttagaaagccaaatgtctggtttgttattgaag
gtaaacgagaacgaagtttgggtaaaactaatcgggacttttaatgcatacaatgtgtta
gctatctacggaactgcgatagaattaggaatggatagccttgaggctttgcgattgtta
tctgatttggagagtgtttcagggcgttttcagtatataatttccgagagtaatattacg
gcaatcgttgattatgctcatactccggatgcgctagagaatgttttgaaaaccatcgaa
gatgtccgtaccaaaaacgagcaattgataacggttgtgggatgcggaggaaacagagac
aaaacaaagcgtcctataatgtccaaaattgctacagatcttagcgataaagcgatttta
acttcggataatccgagaaacgaaaatccggaagtcattttggatgaaatggaaatggga
gtagaaccgcagaattacaaaaaaatgctgagaatcaccgatcgaaaacaagccataaaa
acagcttgccaattggcacagtctaacgatattattctgattgcaggcaaaggacacgag
acctatcaggaagtaaacggagttcgccatcattttgatgatatggaaacggtgaaagaa
attttagaacaattaggaaaataa
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