KEGG   Flavobacterium flavipigmentatum: LNP22_15065
Entry
LNP22_15065       CDS       T10330                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
ffv  Flavobacterium flavipigmentatum
Pathway
ffv01501  beta-Lactam resistance
ffv01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:ffv00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    LNP22_15065
   01503 Cationic antimicrobial peptide (CAMP) resistance
    LNP22_15065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ffv03036]
    LNP22_15065
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ffv02000]
    LNP22_15065
   01504 Antimicrobial resistance genes [BR:ffv01504]
    LNP22_15065
Chromosome and associated proteins [BR:ffv03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    LNP22_15065
Transporters [BR:ffv02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   LNP22_15065
Antimicrobial resistance genes [BR:ffv01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    LNP22_15065
SSDB
Motif
Pfam: YknX_C BSH_CzcB Beta-barrel_RND_2 BSH_RND BSH_CusB BSH_YknX Biotin_lipoyl RND-MFP_C
Other DBs
NCBI-ProteinID: UFH38047
LinkDB
Position
3521517..3522605
AA seq 362 aa
MNTKILQSTALFFMAVFLLSSCNSKKEETVTAEIEPKTETFLLQKERLATELRLPAELTG
FQQVDLYAKVSSFVKLLKVDIGTKVKKGQLLIVLEAPEISSQLAAAESRLRSMEAIYTTS
KSTYNRLYETSKVEGTISKNDLEMASGKKNSDYAQYQAAVAAHKEVAIMRGYLEIRAPFD
GIVSARNVNLGTYVGPAGKGSDLPLLTLQQQSKLRLAVSVPELYTGYLHNGDEMSFSVKS
LPETFKAKIQRMSGALDLKLRSERVEMDVQNTRGDLLPGMVAEVVLPLNAKDSTFVVPKS
AFVNSAEGTFVIKVLNHKATRVDVKKGREIDDKIEIFGDLNANDKLVKIASEEIKEGDVI
NE
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgaacactaaaatactacaatcgacagcgctattttttatggcggtatttttactaagc
agttgtaattctaaaaaagaagaaacggttacggcagaaattgaacccaaaacagaaacc
tttctgttgcaaaaagaaagactagctacagaactgcgcttaccagccgaattaacaggt
tttcagcaagtagatctgtatgcaaaagtgagcagttttgtaaaattgctaaaagtagac
attggtacaaaagtaaaaaaaggacaacttttaatcgttttagaagcacccgaaatcagt
tcgcaattggctgccgccgaatcaaggctgcgatcgatggaagccatttatactacgagc
aaaagcacctacaaccgtttgtatgaaaccagcaaagtagaaggaacgatttctaaaaac
gacctagaaatggcaagcggaaagaaaaactctgattatgcccaataccaagccgctgtt
gccgcacacaaagaagtagcgattatgagagggtatctcgaaattcgtgcaccatttgac
ggaatcgtttcggccagaaacgtcaacttaggtacttatgttgggccagcgggaaaaggt
tcagatttgcctttgcttacccttcagcaacaaagcaaattgcgtttggctgtttcggtt
ccggagttgtacacgggttatttgcacaatggcgacgaaatgagttttagcgtaaaatcg
ttacccgaaaccttcaaagccaagattcagagaatgtcgggtgctttagacctaaaatta
cgttcagagcgcgtagaaatggacgtgcaaaacacccgtggcgatttgttacccggaatg
gtagccgaagttgtattgccgcttaacgcgaaagacagcacgtttgtagtaccaaaatcg
gcctttgtcaattcggcagaaggaacgtttgtcatcaaagtcctcaaccacaaagccaca
agagtcgatgtaaaaaaaggcagagaaatagacgataaaatagaaatctttggcgacctc
aacgccaacgacaaactcgtaaaaatcgccagcgaagaaattaaagaaggtgatgttatc
aacgaataa

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