Flavobacterium flavipigmentatum: LNP22_15215
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Entry
LNP22_15215 CDS
T10330
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ffv Flavobacterium flavipigmentatum
Pathway
ffv01501
beta-Lactam resistance
ffv01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ffv00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LNP22_15215
01503 Cationic antimicrobial peptide (CAMP) resistance
LNP22_15215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ffv03036
]
LNP22_15215
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ffv02000
]
LNP22_15215
01504 Antimicrobial resistance genes [BR:
ffv01504
]
LNP22_15215
Chromosome and associated proteins [BR:
ffv03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LNP22_15215
Transporters [BR:
ffv02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LNP22_15215
Antimicrobial resistance genes [BR:
ffv01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LNP22_15215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
RND-MFP_C
BSH_RND
YknX_C
HH_MFP_RND
BSH_CusB
Biotin_lipoyl
CzcB_C
BSH_CzcB
Beta-barrel_RND_2
BSH_YknX
HH_EMRA
PNGase_F-II_N
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
UFH38077
LinkDB
All DBs
Position
3550578..3551720
Genome browser
AA seq
380 aa
AA seq
DB search
MKNVIISSFILALVLSSCADKAQAPAPAAPILPVLAITSSNANTDAEYPAAIQGAVDVEI
RPQVSGNLERVYVDEGAYVAKGQTLFKINERPYREQLNNALASLHAAEAAYINAQLEVDK
LTPLVQNKVVSDYQLKTAKASQKIAAANIEQAKAMVGSAKINLGYTNVTAPVSGYIGRLP
KKQGSLVGATDPQPLTNLSDVHEVFVYFSLGETDFIKFKEQYAGNTIGEKIKKLPPVSLI
LADNNAYAQTGKIDMVDGQFDKTTGAITLRATFPNAKGLLRSGNTGRIRLGIQHDDAILV
PQSATIEMQDKIFVFSVNKENKVTKTPITISGKSGNNYLIKDGVKAGDQIVLSGIDKLQE
GQEIQPEKSTAKVAQIINKK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgtaattatatccagttttatccttgcgctcgtattaagtagttgtgcggat
aaggcgcaagcaccagcaccagctgcccctattcttcctgttttagcgatcaccagttca
aacgctaacacagatgcagaatatccggctgcgatacaaggagctgtagatgtcgaaatt
cgtccgcaagtaagcggaaacctcgaaagagtatatgttgacgaaggtgcttatgtagca
aaaggtcaaacgttattcaaaataaacgaacgtccttatcgtgagcaattgaataatgct
ttagccagtcttcacgctgcagaagccgcttatatcaacgcacaattggaagtagataaa
ttgactcctttggtacaaaacaaagttgtctcagactatcagttaaaaacagccaaagct
tcccaaaaaattgcggctgccaacatcgagcaagccaaagcgatggtgggttcagcaaaa
atcaatttaggatataccaacgttacggctccggtgagcggttatatcggaagattacca
aaaaaacaaggaagtctggttggtgcaacagatccacaacctttaaccaacctttcagac
gtgcacgaagtgtttgtttacttctcattgggcgaaactgactttatcaaatttaaagaa
caatatgcaggaaatacgattggcgaaaaaattaaaaaattacctccagtatccttaatc
ctggcagataataatgcctacgcacaaacagggaaaattgatatggttgatggtcaattt
gataaaacaactggtgcaattactttgagagctacttttccgaatgccaaaggattacta
cgttctggaaatacaggaagaatccgtttaggtattcagcatgatgatgctattctggtg
ccgcaatcggctaccatcgaaatgcaagacaaaatatttgttttttctgtaaacaaagaa
aataaggttaccaaaacgcctatcacaataagtggaaaaagcggaaacaactacctcatc
aaagatggtgtaaaagcaggagatcaaattgtattgagcggtatagacaaacttcaggaa
gggcaggaaattcaacctgaaaaatcaactgcaaaagttgcccaaataattaacaaaaaa
taa
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