Flavobacterium flavipigmentatum: LNP22_15220
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Entry
LNP22_15220 CDS
T10330
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ffv Flavobacterium flavipigmentatum
Pathway
ffv01501
beta-Lactam resistance
ffv01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ffv00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LNP22_15220
01503 Cationic antimicrobial peptide (CAMP) resistance
LNP22_15220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ffv02000
]
LNP22_15220
01504 Antimicrobial resistance genes [BR:
ffv01504
]
LNP22_15220
Transporters [BR:
ffv02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LNP22_15220
Antimicrobial resistance genes [BR:
ffv01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LNP22_15220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Patched
PA_decarbox
Motif
Other DBs
NCBI-ProteinID:
UFH38078
LinkDB
All DBs
Position
3551732..3554893
Genome browser
AA seq
1053 aa
AA seq
DB search
MFKIFIQRPVLATVISILLVILGILGLTKLPLQQFPDIAPPSVLVTAVYPGANAETVLRS
VAPSLEESINGVENMTYMSSTASNDGSLAITVFFKLGTDADQAAVNVQNRVAQATSQLPA
EVVQQGVITAKQQNSFIMAIGMYTDDEAKYDQTFVANYAQINIIPEIKRIPGVGSASIFG
GVKDYSMRVWLNPTQMSTYQVTPNEVMAAIQDKSLEAAPGKFGERSKEVFEYVIKYKGKL
TKPEEYENIAIRSNPDGSVLRLKDVARIELGAYSYNSLTRLNGKKGVVIGIIQLAGSNSN
DIQVAINKLMEKQAKSFPAGIKHNIFYSTKVSLDQSIEQVEHTLLEAFILVFIVVFIFLQ
DFRSTLIPAIAVPVAILGTFFFMQLFGFSINLLTLFALILAIGIVVDDAIVVVEAVHAKM
EHKHLSPKAATHEAMHEITGAIISITLVMAAVFLPVGFMEGSTGVFYRQFAFTMAIAIVI
SAVNALTLSPALAALFLKDNHSLDENKPYVKRGFKEKFFDGFNNSFESLTNRYVGGLQFL
IRRKWISLGGLALITVATIVMVKTTPAGFIPTEDQGFIAIAVNTPSGTSLDGTQKVMTEA
ENTLRGLEASRFVTAISGFNLLTNSTSPSSAVVFVLLKPNEDRGEVKNIEEIMNQVRGKL
GAISGGSFFVFSFPTVPGFSNVEALDMVLQDKTGGKLDKFSGISQNFIGELMKRPEIAVA
FTSFKADYPQLQLDINDEKANQLGVNVKDILQTMQTYFGSAQASDFNRFGKYYRVIVQAD
IADRADPSSIDRVFVKNKTGEMVPINTLVKLTRIYGSETASRYNLFNSISINAIPKPGFS
SGDAIKAIEEVAAQQLPAGYSYEFSGQTREEIASGGQSTTIFLLCLIFIYFLLAAQYESY
ILPLAVILSIPAGIFGVFVAIGLTGIENNIYVQVALVMLIGLLAKNAILIVEFASQRRKS
GQALVRASIEAAKLRLRPIIMTSLAFIVGLIPMMSAKGPSAQGNHSISIGAAGGMISGVI
LGLLIIPVLFIVFQHLQEKLSGKPVAVIHNEEK
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaatatttatacaaagaccagtactggctaccgttatctccattttattggtg
attttaggtatcctaggactcaccaaattgcccttacaacagtttccagatattgcacca
ccttctgttttggtaacggcggtttatccgggagccaatgccgaaacggttttacgttcg
gttgctccttctcttgaagaatctataaacggtgtcgaaaacatgacctacatgagctct
acagcgagtaacgatggtagtttggccattaccgtcttcttcaaattaggaaccgatgcc
gaccaagctgcggtaaatgtacaaaacagagtagcacaagcaacaagtcagttgcctgca
gaagtggtacaacaaggtgttattacggcaaaacaacaaaatagctttatcatggctatt
gggatgtataccgatgatgaagcaaaatacgatcagacttttgtggccaattatgcccag
atcaatatcattccggagatcaaacgtattcccggtgtgggatcggccagtatttttggt
ggtgtaaaagattattcgatgcgtgtttggctcaatccaacacaaatgtcaacttatcag
gtgacgccaaacgaagtaatggcagccattcaagacaaaagtttggaagctgctccaggt
aaatttggagaaagaagcaaggaagtttttgaatatgtaatcaaatacaaaggtaaatta
accaaacccgaagaatacgaaaatattgccatccgatctaatccggacggttctgtactt
cgcttaaaagatgttgccagaatagaactcggagcttattcgtacaacagtttaacccga
ttaaatggtaaaaaaggtgttgtaatcgggatcattcagttggccggttctaattcgaat
gatattcaggtagcgatcaacaaactgatggaaaaacaagccaaaagttttccagcaggt
attaaacacaatattttttacagcacaaaagtatctttagaccaatcgatagaacaggtt
gaacacactttgttagaagcatttatactggtttttatagtagtatttattttcttgcag
gacttcagatcgactttgattccggcaatagcagtgccagtagctattttaggaactttt
ttcttcatgcagttatttggtttctcgattaacttattgacattgtttgccttaattcta
gccattggtatcgtcgtcgatgatgcgattgtggtcgtcgaagccgtacatgccaaaatg
gagcacaaacatttgtcaccaaaagcagctacacacgaggcgatgcacgaaattactgga
gcgattatttcgattacgctggtgatggccgcggtattcttacctgttggttttatggag
ggttctacaggcgttttctaccgtcaatttgcttttacaatggcaattgcaattgtgatt
tctgccgttaatgctttgactttaagtcctgccctagccgctttattcttaaaagacaat
cattctttggatgaaaataaaccgtatgtaaaaagaggatttaaagaaaaattctttgac
ggattcaacaatagtttcgagtctttaactaaccgttatgtgggtggtttgcaattttta
atccgtagaaaatggattagcttaggcggattagccttaattacagtagctactattgta
atggtaaaaacaactccagcaggatttatcccaacagaagatcaaggatttattgcaata
gcagtaaatacgccatcagggacttcattagatggaactcaaaaagtgatgaccgaggca
gaaaatactttaagaggtttggaggcttcccgatttgtaacagcaatttcaggttttaat
ttgctgacaaactcaaccagcccttcatcggcagtcgtttttgttttgcttaaaccgaat
gaagaccgtggagaagtaaaaaacattgaagaaataatgaatcaggttcgaggaaaatta
ggcgccatttcgggcggaagtttcttcgtatttagtttccctactgttcctggtttcagt
aacgtagaagctttagacatggtgttgcaggacaaaacaggtggcaaattggacaagttt
agcgggatttctcagaacttcatcggagaattgatgaaacgcccagaaattgcggttgct
tttacctcttttaaagcagattacccgcaattgcaactggatattaatgatgaaaaagcc
aatcaattgggtgtaaatgtcaaagatattctacagacgatgcaaacctattttggtagc
gctcaggcttccgattttaatcgatttgggaaatattaccgagtaattgttcaggcagat
attgccgacagagcagatccatcttctatcgaccgtgtttttgtcaaaaacaaaacagga
gaaatggtacccataaatacattggttaaactcacacgtatttatggatctgaaacggct
tcgagatacaaccttttcaactcaatttcgataaatgcaattccgaaaccaggttttagt
tcaggagatgccatcaaagcgattgaagaagtcgctgcacaacaattgcctgcgggttat
agttatgagttttcaggacaaacacgggaagagattgcttctggaggtcaatctacaacc
attttcttattgtgtctgatattcatttacttcttattggctgcacaatacgaaagttat
attttgccattagccgtaatattatcaatacctgcaggaatctttggtgtatttgtagcc
atcggtttaacaggaatcgaaaacaatatttacgtacaagtagcactggtgatgctgatt
ggattattagccaaaaacgctattttgattgtcgaatttgcgtcgcagcgaagaaaatca
ggacaggcattggtacgcgcttctatcgaagctgcaaaactgcgtttacgaccaattatc
atgacgtcattggcttttattgtgggattgattccgatgatgagtgccaaaggaccatca
gcccaaggtaatcattcgattagtattggggcggctggcggaatgatttcgggggtaatt
ctgggactgttgatcatcccagttttatttatcgtattccaacatttacaagaaaagctt
tctggaaaaccagtagccgtaattcataacgaagaaaaataa
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