KEGG   Fulmarus glacialis (Northern fulmar): 104083995
Entry
104083995         CDS       T08370                                 
Symbol
TARDBP
Name
(RefSeq) TAR DNA-binding protein 43
  KO
K23600  TAR DNA-binding protein 43
Organism
fga  Fulmarus glacialis (Northern fulmar)
Pathway
fga03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:fga00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    104083995 (TARDBP)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fga03019]
    104083995 (TARDBP)
Messenger RNA biogenesis [BR:fga03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     104083995 (TARDBP)
SSDB
Motif
Pfam: TDP-43_C RRM_1 RRM_7 RRM_PARP14_3 RRM_3 Nup35_RRM_2
Other DBs
NCBI-GeneID: 104083995
NCBI-ProteinID: XP_009585979
LinkDB
Position
Unknown
AA seq 330 aa
MDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHS
KGFGFVRFTDYETQVKVMSQRHMIDGRWCDCKLPNSKQSPDEPLRSRKVFVGRCTEDMTA
DELRQFFAQYGEVVDVFIPKPFRAFAFVTFADDQVAQSLCGEDLIIKGISVHISNAEPKH
NSNRQLERGGRFGGNPGGFGNQGGFGNSRGGGGGLGNNQGSNMGGGMNFGAFSINPAMMA
AAQAALQSSWGMMGMLASQQNQSGPSGNNQPQGNMQREQNQGFSSGNNSYGGSNSGAAIG
WGSASNAGSSSGFNGGFGSSMDSKSSGWGM
NT seq 993 nt   +upstreamnt  +downstreamnt
atggatgaaacagacgcatcatcagccgtgaaagtgaaacgagcagtacagaagacttcg
gatttaatagtcttgggtcttccctggaaaaccactgaacaagacttaaaggagtatttc
agtacctttggagaagttctgatggtgcaggttaagaaggatattaaaactggccactca
aaaggttttggttttgttcggtttacggattatgaaacccaggtgaaagtaatgtctcag
cggcacatgatagatggaagatggtgtgactgtaaacttcccaattctaagcaaagtcct
gatgaacctttgcgtagcagaaaagtgtttgttgggcgctgcaccgaggacatgacggca
gatgaactccgacagttctttgcccagtatggagaagtggtagatgtcttcattcctaaa
cccttccgagcttttgcttttgttacatttgcagatgatcaggttgcccaatctctttgt
ggagaggacttgatcattaaaggaatcagcgtacatatatccaatgctgaacctaagcac
aatagcaatagacagttagagagaggtggaagatttggtggtaatccgggaggctttggg
aatcaagggggctttggcaacagcagaggaggtgggggaggactgggtaacaaccagggc
agtaacatgggtggaggtatgaacttcggagcctttagcatcaaccctgccatgatggca
gcagcacaggcagccctgcagagcagctgggggatgatgggcatgctggctagtcagcag
aaccagtcggggccgtcgggaaacaaccagcctcaaggcaacatgcagcgggagcagaac
cagggctttagttcaggaaataactcctacggcggttccaactcgggggcagcaataggc
tggggttcggcctcgaacgccggctccagcagtgggtttaacggaggctttggttcaagc
atggattccaaatcgtcaggctggggaatgtag

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