Fulmarus glacialis (Northern fulmar): 104083995
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Entry
104083995 CDS
T08370
Symbol
TARDBP
Name
(RefSeq) TAR DNA-binding protein 43
KO
K23600
TAR DNA-binding protein 43
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104083995 (TARDBP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fga03019
]
104083995 (TARDBP)
Messenger RNA biogenesis [BR:
fga03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
104083995 (TARDBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TDP-43_C
RRM_1
RRM_7
RRM_PARP14_3
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
104083995
NCBI-ProteinID:
XP_009585979
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHS
KGFGFVRFTDYETQVKVMSQRHMIDGRWCDCKLPNSKQSPDEPLRSRKVFVGRCTEDMTA
DELRQFFAQYGEVVDVFIPKPFRAFAFVTFADDQVAQSLCGEDLIIKGISVHISNAEPKH
NSNRQLERGGRFGGNPGGFGNQGGFGNSRGGGGGLGNNQGSNMGGGMNFGAFSINPAMMA
AAQAALQSSWGMMGMLASQQNQSGPSGNNQPQGNMQREQNQGFSSGNNSYGGSNSGAAIG
WGSASNAGSSSGFNGGFGSSMDSKSSGWGM
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaacagacgcatcatcagccgtgaaagtgaaacgagcagtacagaagacttcg
gatttaatagtcttgggtcttccctggaaaaccactgaacaagacttaaaggagtatttc
agtacctttggagaagttctgatggtgcaggttaagaaggatattaaaactggccactca
aaaggttttggttttgttcggtttacggattatgaaacccaggtgaaagtaatgtctcag
cggcacatgatagatggaagatggtgtgactgtaaacttcccaattctaagcaaagtcct
gatgaacctttgcgtagcagaaaagtgtttgttgggcgctgcaccgaggacatgacggca
gatgaactccgacagttctttgcccagtatggagaagtggtagatgtcttcattcctaaa
cccttccgagcttttgcttttgttacatttgcagatgatcaggttgcccaatctctttgt
ggagaggacttgatcattaaaggaatcagcgtacatatatccaatgctgaacctaagcac
aatagcaatagacagttagagagaggtggaagatttggtggtaatccgggaggctttggg
aatcaagggggctttggcaacagcagaggaggtgggggaggactgggtaacaaccagggc
agtaacatgggtggaggtatgaacttcggagcctttagcatcaaccctgccatgatggca
gcagcacaggcagccctgcagagcagctgggggatgatgggcatgctggctagtcagcag
aaccagtcggggccgtcgggaaacaaccagcctcaaggcaacatgcagcgggagcagaac
cagggctttagttcaggaaataactcctacggcggttccaactcgggggcagcaataggc
tggggttcggcctcgaacgccggctccagcagtgggtttaacggaggctttggttcaagc
atggattccaaatcgtcaggctggggaatgtag
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