Fusarium graminearum: FGSG_04154
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Entry
FGSG_04154 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
fgr
Fusarium graminearum
Pathway
fgr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
FGSG_04154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fgr03400
]
FGSG_04154
Enzymes [BR:
fgr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
FGSG_04154
DNA repair and recombination proteins [BR:
fgr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
FGSG_04154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_N
DNA_ligase_A_M
BRCT_2
DNA_ligase_A_C
BRCT
RNA_ligase
LIG3_BRCT
DNA_ligase_IV
RTT107_BRCT_5
ArnB_C
Motif
Other DBs
NCBI-GeneID:
23551417
NCBI-ProteinID:
XP_011321476
LinkDB
All DBs
Position
2:complement(4925088..4928093)
Genome browser
AA seq
941 aa
AA seq
DB search
MSQNDDAQHEDDIQYASMGVTREELEEKYPNRPKNHSKTLVFSELFREVFNPLNENKKQN
AAGSGPKKSFRGVNKLSPHEQRRHIIDRFITRWRKEVGPDFYPALRLILPDKDRDRGVYG
LKENAIGKLLVKLMKIDKNSEDGYSLLHWKLPGQTMASRLAGDFAGRCFEVISKRPMRTQ
VGNMTIAEVNEQLDKLASSSGEMENLLLKQMKVGATEKTFLDLWHPDGDALFSVSSSLKR
VCWELWNPEIRLEQDETGVALMQCFQPQLAQFQMPASFQKMIQLLRPTEEDPEFWIEEKL
DGERMQVHMVQDKSHPGGRKFCFWSRKAKDYTYLYGDGLQDETSSLTRHLKDAFASGVKN
LILDGEMITWDMGVDKIVPFGTLKTAAISEQQNKSASDTVHPTGPTSSSRKGNKTRLSST
RNHEYTSATSADAIEPLLREVVANASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGE
SLDCVIIAGYYGTGKRGGALSSFLCGLRVTQNHIQAGANPEKCFSFFKVGGGFRAEDYAE
IRHRTEGKWIEWDQRNPPSEYIELGGGEARQFERPDVWIRPKDSVVVSVKAASVGPSDSF
ALGFTLRFPRFRRLRLDRSWNTALSLEEFQELKQRVDEESKEKAMTVEDRKRHNPKRVKR
ELTIAGEDTKVAEFMGETTKLFEGLEFCVLSEALKPYKKTKTQLETIIKENGGVISQRAA
PGTNMVLIADKKVVKVASLVKGGDVNIIRPKWIRDCLEQELGAFLLPFEDTHLFHATDAL
KRAASENTDQFGDSYTRDLSIEELRQVMNDMPKIEDGISFDKNEFLQQLEERGKDLGPLK
SLTFRRCVMLFHAVEAGDKRISRLENLVRYGGGSVTGDANDLSVTHVVIQGDDPMQVGEA
ADMIRKELSSRSIQPRVVTGAWIDECWKESTLLDEEQFVVP
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaaacgacgacgcacagcatgaagatgatatccaatatgcttccatgggagta
actcgtgaagagctggaagaaaagtatccaaaccgcccaaagaatcactcaaagacactc
gttttctctgagctgttccgagaagtcttcaacccgctcaatgaaaacaagaagcagaac
gccgcgggctcggggcctaaaaaatcgtttcgtggagtgaacaagctctccccccacgaa
caacgtcggcacatcattgaccgtttcattacccgatggcgcaaggaagttggtcctgat
ttctatcctgcgttgcgcttgattctcccagataaggatcgcgaccgtggagtttacggc
ctcaaagaaaacgcaattggaaaactactcgtcaagctcatgaagatcgacaaaaactct
gaagatggctacagtcttttgcactggaagttgcctggccagactatggcatctcgactg
gccggtgactttgctgggcgttgcttcgaggtcatctcaaagaggccaatgcgaacacag
gtcggcaacatgacaattgccgaggtgaacgagcagctggataagcttgcgtcttccagc
ggagaaatggaaaatctgctcctcaagcagatgaaagtcggtgccacggagaagactttc
ttagatctttggcatccagatggtgacgccttattcagcgtatcatcaagcttgaagcgt
gtgtgctgggaactctggaatccagaaattcgtcttgaacaggacgagacaggcgtcgct
ctaatgcaatgtttccaacctcagctggctcaatttcagatgcctgcgtctttccaaaag
atgattcaactccttcgaccgaccgaagaagatcccgagttttggatcgaagagaagctg
gacggtgagcgtatgcaagtgcacatggtccaggataagagtcacccgggtggcaggaag
ttttgtttctggtcacgaaaggctaaagattacacatatctttacggtgacggtctccaa
gacgaaacgtcgagtcttactagacatctcaaggatgccttcgcatccggcgtgaaaaac
ttgatcttggacggcgagatgatcacttgggacatgggtgtcgacaagatagtacctttc
ggcaccctaaaaacagcagcaatttccgagcagcaaaacaagtcggcctctgacacagta
caccctacgggaccgacatcgagctctagaaaaggcaataaaacccgtttatcgtcgact
cgaaatcacgaatacaccagcgcaacgagtgccgatgccattgagcctcttcttcgcgaa
gtggttgctaacgcttccgaaggccttgttttgaagaacccacggtccatgtaccgcctc
aacagccgaaacgacgactggctcaaagtgaaacctgaatacatgtccgagtttggagag
tcccttgactgtgtcattattgctggctactatggtacaggaaaacggggtggcgctcta
tcaagtttcctgtgtgggctgcgtgtcacgcaaaaccatatacaagctggtgcgaatcct
gaaaagtgcttcagtttcttcaaagttggtggtggttttcgcgcagaggactatgcggaa
atccgacatagaacggaaggcaaatggatcgaatgggatcaacgaaacccaccgtcagag
tatattgagctgggaggaggtgaggctagacaatttgagcgcccggatgtttggattcgg
cccaaagattccgttgtggtctcggtcaaagccgccagtgttgggccttccgattcgttc
gctctgggtttcactttgcgatttccacggttcaggcgtctgcgattagaccggagctgg
aatactgctctctcactcgaggaattccaagagttgaaacaacgtgtcgacgaagaatca
aaggagaaggcgatgacggttgaagacaggaagcgccacaaccctaaacgagtcaagagg
gaactcaccattgctggagaagataccaaggtggccgagtttatgggagagacgacaaaa
ctgttcgaaggcctggaattttgtgttctttccgaagcactcaagccctacaaaaagacc
aaaactcagcttgagaccatcatcaaggagaatggcggcgtcatctcgcaacgagcagca
cctggcacgaacatggttcttatcgccgataagaaggtcgtcaaagtggcaagtcttgtg
aaaggaggggacgtgaacatcatccgccccaaatggattagagattgcctcgagcaggaa
ttgggcgcgtttcttttgccatttgaggatacacatctattccacgcaactgatgcgttg
aaaagggcggcgagcgaaaacacagatcagtttggtgacagctacacacgcgatctatct
atcgaagagcttaggcaagtcatgaatgacatgccaaagattgaggacggcatatccttt
gacaagaatgaattccttcaacagcttgaggaacgtggaaaagacctggggcccttgaag
agcctcacctttcggcgttgcgtgatgctatttcacgccgtggaagctggcgataaaagg
atttcgaggctagagaatctcgtcaggtatggcggaggaagtgtcacaggtgacgcaaac
gacttatccgtgactcatgtggtgatacaaggcgacgacccgatgcaggttggcgaggca
gctgatatgattcgcaaggaactaagctctaggtctatacagccgcgagtggtgacaggg
gcttggatcgacgaatgctggaaagagagcacgctacttgacgaagagcaattcgtggtc
ccttaa
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