Fusarium graminearum: FGSG_07013
Help
Entry
FGSG_07013 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
fgr
Fusarium graminearum
Pathway
fgr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
FGSG_07013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fgr03400
]
FGSG_07013
Enzymes [BR:
fgr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
FGSG_07013
DNA repair and recombination proteins [BR:
fgr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
FGSG_07013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
23554112
NCBI-ProteinID:
XP_011326700
LinkDB
All DBs
Position
4:complement(2028202..2031419)
Genome browser
AA seq
938 aa
AA seq
DB search
MPLPFSSICELLDQCYTLSLTRKSCASIVIDWFDRHRNYVDAHDTSLSALLSTLLPDKRT
DRVYCIQAPSLERIIGRACLLGASRIAELARYRQPGSGVDLADCVHRILTVTASMTPANR
TDVELMYRRLSAVEARWFTRLILKRYQPLVLDPHLIYRLCDPLLPCVLKVQDDFATAITT
TQTLRRRLIPNSGRQTPREQIMGTAKPQLGIKIGRQPWIKGRSIKHCLDMGHGRMSVEEK
IDGEYCQIHIDPNKGDRCIQIFSKSGKDSTEDRVALHGTIIESLKIGQPDARVTKGCILE
GELVVPGPQEHLMIIYYDIMLLDDQSLINLRHSERFKILSNLICCSKGWAELVPRQVVDF
GQPLGVSALRKTFALTILARKEGLVLKPDEPYFDFKDQRRKFSSCCIKLKKEYIGNLGDV
GDFAVVGAKYDSAKTISYRIPGLKWTHFYVGCLDNRESVRSWKAKPEFTIVNVVELNETL
LREVVTYSNPEPVAPRDNEAIILKQAPGVEQGLPPTAIFTKPLVFDIKCFSFDRMGSTGF
WSLRFPSVTKVHFDRDFTDTISFEQLQKLAKDATTAAALEDSQENLQWIAKLEAADPRGI
AVDAASQLTVTTMPTPSPRKSTQNTTSTWSPTSPLTTRSPAGNIDSPCRDRVGRSSPLIL
STAVATLPTPAAPLDSPTGQRAKQKRDPLIIQPAPPHKRPKLYTESPSKDKHPLDSATSS
QPRQPLNGVNDNSRSQPVMITCASLSTSGSDSDENNAPGSAPCVDLATSVPSGNDLETDA
ELRRDIPVNNIVSTGTKGCIYANEECAFVKTDMLISPGLLNNPIAKTLLKLHGIENPVEN
LDAWLEQKKSGKLRETGISSTKIFLLCQSDEKEATKSLFDKIQKVREWIPHRLQNWIHVY
DWRVLQHVTVQEDDTVQPKDYDGFHTPWQRWRIGPGLI
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcctttctcttccatttgcgaattacttgaccagtgttacactctttctctc
actagaaagagttgtgccagcatcgtcatagattggtttgataggcatcgcaattatgtc
gacgcccatgataccagcctctcggcactcttgtcgaccttactcccagacaagagaacc
gatagagtttactgtattcaggctcccagcctggaaagaatcatcggccgtgcatgtctt
ctaggggcctcacgtatcgccgagctggctcgataccgtcaaccaggttctggtgttgac
ctagcagactgcgttcatcgcattctgactgtaacagccagcatgactccagccaacaga
acagatgttgagctcatgtacagaaggctgagtgcagtagaggccaggtggttcacaagg
ttgattttgaaaaggtatcaaccgctggtattagacccacatctcatatatcggctctgc
gaccctcttcttccttgcgttctcaaggttcaagacgattttgctactgcgattaccact
actcaaacgttacgaaggagattaatcccaaattctggacgacagacaccgcgtgagcaa
atcatgggtacggcaaagccccaactgggcatcaagattggacgacagccttggatcaaa
ggccgtagtatcaagcattgtttggatatgggccacgggcgtatgagtgtggaagaaaag
atcgatggcgaatactgccagatacatatagatccaaataaaggagatcggtgcattcaa
attttttccaagagcggcaaagacagcactgaagatagggttgcacttcacgggacaata
atagaatcgctcaaaattggacagcccgacgccagagtcaccaagggttgtatcttggaa
ggggagttggttgtgcctggaccacaagaacacctaatgattatatattatgacataatg
cttcttgacgatcagtcactgatcaatctacggcactcggagaggtttaaaattctttcc
aatcttatctgttgtagtaaaggatgggcagaactagttcctcgacaagttgttgatttt
ggccaaccacttggcgtatcggccttgcgcaaaacgtttgccttgaccatcttggcccga
aaagaaggcctcgttttgaagccagatgagccctactttgacttcaaagatcaacggcga
aaattctcgagttgctgtatcaagctcaaaaaagagtacattggaaacttgggagatgtt
ggcgattttgcagttgtcggggccaagtacgactcggcgaaaacaatctcctacaggatt
ccagggttgaaatggacgcatttttatgttggctgcttggacaacagagaatcggttaga
agttggaaggccaagccggaattcacgatcgtcaatgtcgttgaactaaacgaaacgctt
cttagggaggttgtcacctactcaaacccagagcccgttgccccaagagataacgaggcg
atcattctcaagcaagcccctggcgttgagcaagggttgcctccaactgctatatttact
aaaccgctggtctttgacatcaaatgcttcagctttgatagaatgggaagcactgggttt
tggagcctgcgatttccttcagtgacaaaagtacattttgatcgggatttcactgacacg
atatcctttgaacagttgcaaaagctggccaaggatgcgactacagcggctgctctcgag
gatagtcaggagaacttacaatggattgccaaactagaggcagccgacccgcgtggtatt
gcagttgatgctgctagtcagttgacagtgacaactatgccaacaccgtcgcctcgaaag
tcaacacagaataccacctctacatggtctcccacttccccactaacaacaagatcacca
gcgggcaatattgatagcccttgccgtgatagggtcggaagatccagccctttaatatta
tctactgcggtagccacgctgcctacacctgctgcaccgctcgattcacccaccgggcag
cgtgcaaaacagaaacgtgatccgctcattatacagcctgcaccaccacataaacgcccg
aaactgtacactgaatcaccgtcgaaagataaacacccgctcgacagcgcaacaagttca
caaccacgccaacctctcaacggtgtgaacgacaactcgcgctctcagcctgtcatgatt
acttgcgcatctctgtccacctctggttccgactcggatgagaataatgctccgggttct
gcaccgtgcgtcgaccttgcaaccagtgttccttctgggaatgatctcgagaccgacgca
gaacttcgccgtgatattccagtgaataacatcgtttctactggcactaaggggtgcatc
tatgcgaacgaggagtgtgcatttgtaaaaacagatatgttgatttcacctggacttctc
aataatccgatagctaagacactacttaagctacacggaattgaaaatccagtcgagaac
cttgatgcttggctggaacagaaaaagtcaggtaagctcagagagacagggatcagcagc
accaagatctttcttctgtgtcaatcggacgagaaagaagcgacaaagtccctttttgac
aagatccagaaagtacgggaatggatcccacacagactacagaactggattcatgtttac
gactggcgcgttctgcaacatgtgacagtccaggaggatgacactgtccaacccaaagat
tacgatgggttccataccccgtggcagcgctggcgcatcggacctggacttatctaa
DBGET
integrated database retrieval system
