Fusarium graminearum: FGSG_07165
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Entry
FGSG_07165 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
fgr
Fusarium graminearum
Pathway
fgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGSG_07165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_07165
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
FGSG_07165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_23
AAA_15
AAA_22
DUF3584
AAA_28
PduV-EutP
AAA
SRP54
AAA_25
AAA_16
ORC-CDC6-like
RsgA_GTPase
AAA_14
Arf
FtsK_SpoIIIE
nSTAND3
AAA_13
NACHT
Motif
Other DBs
NCBI-GeneID:
23554257
NCBI-ProteinID:
XP_011326883
UniProt:
V6RG06
LinkDB
All DBs
Position
4:2580765..2581628
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AA seq
287 aa
AA seq
DB search
MTLPPKPPRVEVNNLSYTFPDYSTGVNNITLDLPPRSRTLLIGANGAGKTTLLRLLAGKR
LAPSDTISICGVDPFKEGLEGVTYLGLEWVLNPIVRTDIGVNELLSSVGGDAYPDRRDEL
VAMLDVDTNWRMHAVSDGERRRVQLAMGLLRPWTVLLLDEITVDLDVLSRAEFLAWLKNE
TEIRECTIVYATHILDNLAGWPTHLAHMHLGTVKEWDEADKMLATIDGTVGASGNSRLGE
LVLSWLRDDLKERGPRSGINRGSEGKTYGFGGIQIGGYGDESKPRKE
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgactcttcctcctaagccccctcgtgtcgaggtcaacaacctctcatacacgttccct
gactactcaactggtgtcaacaacattactctcgaccttcccccgcgatcccgtactctg
ctcattggcgccaacggtgccggtaagacgactctgcttcgtctcctcgctggcaagcgt
cttgcgcccagtgacaccatctctatctgcggagttgatcctttcaaggaaggtcttgag
ggtgtcacttatctcggtctcgaatgggttctcaaccccattgtccgaactgatattggt
gtcaacgagctgctcagctctgttggcggtgatgcgtaccccgatcgtcgagatgagctt
gtagccatgctcgacgtcgacaccaactggcgcatgcacgctgtttctgacggtgagcgt
cgtcgcgttcagcttgcaatgggtcttctgagaccctggactgtcctgcttctcgatgag
atcactgttgatctcgatgtcctgagccgtgccgaattcctcgcctggctcaagaacgag
acagagatccgagagtgcaccatcgtttacgctacccatatcctggacaaccttgctggc
tggcctactcacctcgcgcatatgcacctcggtactgtcaaggagtgggacgaggccgac
aagatgcttgccaccatcgacggcactgtcggtgcctctggcaacagtcgtctgggagag
ctcgtcctgagctggctccgcgatgacctgaaagagcgaggaccacgaagcggtatcaac
cgcggttctgaaggcaagacgtacggttttggaggaatccagattggcggctatggcgac
gagtctaagccgcgtaaagaatag
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