Candidatus Filomicrobium marinum W: BN1229_v1_1024
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Entry
BN1229_v1_1024 CDS
T03856
Symbol
bepF
Name
(GenBank) Efflux pump periplasmic linker BepF
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
fil
Candidatus Filomicrobium marinum W
Pathway
fil01501
beta-Lactam resistance
fil01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BN1229_v1_1024 (bepF)
01503 Cationic antimicrobial peptide (CAMP) resistance
BN1229_v1_1024 (bepF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fil03036
]
BN1229_v1_1024 (bepF)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fil02000
]
BN1229_v1_1024 (bepF)
01504 Antimicrobial resistance genes [BR:
fil01504
]
BN1229_v1_1024 (bepF)
Chromosome and associated proteins [BR:
fil03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
BN1229_v1_1024 (bepF)
Transporters [BR:
fil02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
BN1229_v1_1024 (bepF)
Antimicrobial resistance genes [BR:
fil01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BN1229_v1_1024 (bepF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND
YknX_C
BSH_CusB
HH_CzcB
BSH_CzcB
HH_EMRA
tRNA_anti-codon
CzcB_C
Biotin_lipoyl
BSH_YknX
SpuA_C
Motif
Other DBs
NCBI-ProteinID:
CFX09229
UniProt:
A0A0D6JC86
LinkDB
All DBs
Position
1:950669..951799
Genome browser
AA seq
376 aa
AA seq
DB search
MTPKPILTVLAICLSVCSVWPKEARSQTPGANQPPPSVIVDAVHNQEISPQQTFTGRVQA
IDKVTIKARVSGFIKSRGFEEGAEVKAGQILFELEREPYEAAVELAKANLASAQAGQALA
QATYDRIKPLTDKGTTSQATLDDADAKLSQAKAAVEAEKANLTKAQLDLNYTVIRSPMDG
RTGRATYAVGEYVTPSSNPLVTVVRQDPMYVAFAVPQRVLLHARREGFNSDNVIVRLTLP
DGSIYKHDGSISFAEVEGNAGTDTVTIRASIPNPERLLVDQQLLGVSVISKTAEKKLVMS
QSAVLLDQEGAYVLVVNKDNKVEMRRVELGDQVSPNVIINKGLEEGDRVIVSGHLKARPG
SLVEPHLAKADISAQN
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgaagcctattctcaccgttctcgccatatgcctttcggtgtgttcggtatgg
ccaaaagaagcacgcagccaaacgcctggagccaatcaaccgccaccaagcgttatcgtg
gacgcggtacacaaccaggaaatctcgccacaacagacgttcaccggacgtgtgcaggcc
atcgacaaagtcacgattaaggcgcgagtttcaggcttcataaaaagtcgcggcttcgaa
gagggggccgaagtcaaagccggacaaatcctgttcgaactggaacgtgaaccctatgaa
gcagctgttgagttggccaaagccaatctcgccagcgctcaagccggacaagcgctcgcc
caagccacatacgaccgcattaagcctctgacagacaagggaacgacgtctcaagctacg
ctggacgacgccgacgcgaagctgtcgcaagccaaagccgccgtcgaagccgaaaaagct
aatctaacgaaggcacaactcgatttgaattacacggtcatccgatcccctatggacgga
agaacaggccgcgcgacttatgcagtcggtgagtacgtcacgcccagcagtaatcccctc
gtgaccgtcgtccggcaggacccgatgtacgtcgcgtttgcggtgccgcagcgtgtattg
ctccacgcccgccgtgaaggcttcaattcagataacgtcattgtccggctaacgcttccg
gacggctcaatttacaagcacgatggttccattagcttcgccgaagtggaaggcaatgcg
ggcacggacacggtgacaattcgcgcgtccattcccaatccagagcgcctcctcgtcgat
cagcagctccttggcgtatcggttatttccaaaacagccgaaaagaagctggtgatgtct
caatcagccgtcctactcgatcaggagggggcctatgttcttgtcgtgaacaaagataac
aaggttgagatgcgacgcgttgagctcggagaccaagtctcgccgaacgtcatcatcaat
aaaggcctggaggagggtgaccgcgtgatagtcagtggacacctgaaggcacggccgggc
tcgctcgtcgagccacatctcgcaaaagcagacatctcggctcagaactaa
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