Candidatus Filomicrobium marinum W: BN1229_v1_1513
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Entry
BN1229_v1_1513 CDS
T03856
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
fil
Candidatus Filomicrobium marinum W
Pathway
fil03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BN1229_v1_1513 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fil03400
]
BN1229_v1_1513 (nth)
Enzymes [BR:
fil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BN1229_v1_1513 (nth)
DNA repair and recombination proteins [BR:
fil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BN1229_v1_1513 (nth)
Prokaryotic type
BN1229_v1_1513 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
HHH_5
DUF7674
Motif
Other DBs
NCBI-ProteinID:
CFX15715
UniProt:
A0A0D6JDX7
LinkDB
All DBs
Position
1:complement(1443457..1444227)
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AA seq
256 aa
AA seq
DB search
MKADMPGDAKPAPRRAVTQKAQAERKSSRKAGKSAKRSKSSVKLLSPDAIKQVFERFHEI
TPEPKGELEHSNPFTLLVAVVLSAQATDAGVNKATRSLFKIADTPEKMLALGEDRVREAI
KTIGLYRNKARNVIALSQKLIDEFGGEVPQDRDALETLPGVGRKTANVVMNVAFGAATMA
VDTHVYRVARRIGLSAGTTPLAVEDDLLRVVPKEYGVAAHHWLILHGRYLCKARKPECWR
CPISDLCLFEDKTPAP
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccgatatgccgggcgatgccaagcccgctccccgacgggccgtaacgcagaaa
gcccaagcggaacgtaaaagttcccgcaaggctggcaaaagcgcgaagcgctcgaagagc
agcgtaaaacttctgtcgccggacgccatcaaacaagtctttgaacgttttcacgagatt
acccccgagccaaaaggtgagctggagcattccaatcccttcacgcttctggtcgctgtc
gtgctttccgcacaggccacggatgctggcgtcaacaaagccacgcgtagcctgttcaag
atcgccgatacgccagagaaaatgttggctctgggagaggaccgggtgcgtgaagcgatc
aaaaccatcggactttatcgcaacaaagcccgaaacgtcatcgctcttagccagaagttg
attgacgaattcggcggcgaggtgccgcaggaccgcgatgcactggagacactccctggc
gtggggcgcaagacggccaatgtcgtgatgaacgtcgctttcggggctgcgaccatggcg
gttgacacccacgtctatcgcgtcgcgcgccgcatcgggttatcggccgggacgacgcct
ctggctgtcgaagacgacctgttgcgcgttgtgcctaaggaatacggcgtcgcagcccat
cattggctgatcctgcatgggcgctatctctgcaaggctcgcaagccggaatgctggcgc
tgccccatcagcgatctgtgtctctttgaggataagacaccggctccctag
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integrated database retrieval system
