Flavobacterium indicum: KQS_03040
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Entry
KQS_03040 CDS
T01781
Symbol
ygcF
Name
(GenBank) Protein of unknown function YgcF
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
fin
Flavobacterium indicum
Pathway
fin00790
Folate biosynthesis
fin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fin00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
KQS_03040 (ygcF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fin03016
]
KQS_03040 (ygcF)
Enzymes [BR:
fin01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
KQS_03040 (ygcF)
Transfer RNA biogenesis [BR:
fin03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
KQS_03040 (ygcF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
CCG52599
UniProt:
H8XSL4
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All DBs
Position
693052..693726
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AA seq
224 aa
AA seq
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MFNFDVSLQTIFKRMLQKEIQLAVDKGEMLPLMEEFYTIQGEGFYTGTAAYFIRVGGCDV
GCHWCDVKESWNADLHPPTEISTIVSNAKQYAETVVVTGGEPLSWNMLPLTNALKEENLR
VHIETSGAYEVTGSWDWFCLSPKKTKLPTQSAFELADELKVIIHNKHDFMFAEEQATKVN
PKAILFLQPEWSKKEEMTPLIVDYVMNNPKWRVSLQTHKYLNIP
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactttgatgtatctttgcagactatttttaaaagaatgttacaaaaagaaata
caattagccgttgataaaggggaaatgcttcctttaatggaagaattttatacaatacaa
ggcgaaggtttttatactggaacagcagcttattttattagagtgggtggttgtgatgtg
ggttgtcattggtgtgatgttaaagaaagttggaatgctgatttgcatccgcctacagaa
atttcaactatcgtgagtaacgcaaagcaatatgcagaaactgttgttgttactggtggt
gaaccgttatcatggaatatgttgcctttgacaaatgcattaaaagaagaaaatttaaga
gtgcacattgaaacgtcaggggcatatgaggttacaggaagttgggattggttttgtttg
tcacctaaaaaaacgaaattgcccacacaaagtgcctttgaattggcagatgaattgaaa
gtaattattcataataaacacgattttatgtttgctgaagagcaagctacaaaggtaaac
ccaaaggccattttgtttcttcaacccgaatggagtaaaaaagaagagatgactccttta
attgtagactatgtaatgaataatcccaaatggagagtttcattacaaacacataaatat
ttaaatattccttaa
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