Flavobacterium indicum: KQS_10015
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Entry
KQS_10015 CDS
T01781
Symbol
nth
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
fin
Flavobacterium indicum
Pathway
fin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KQS_10015 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fin03400
]
KQS_10015 (nth)
Enzymes [BR:
fin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KQS_10015 (nth)
DNA repair and recombination proteins [BR:
fin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KQS_10015 (nth)
Prokaryotic type
KQS_10015 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
CCG53932
UniProt:
H8XVG8
LinkDB
All DBs
Position
2135470..2136132
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AA seq
220 aa
AA seq
DB search
MTKKEKSTFVINTLNDLYPEIPIPLDHKDAYTLLIAVLLSAQCTDVRVNQITPLLFAKAD
NPYDMIKMTVEEIQDIIRPCGLSPMKSKGIYGLSKILIEKHNGEVPQNFKDLEELPAVGH
KTASVVMSQAFGIPAFPVDTHIHRLMYRWGLSDGKSVEKTEKDAKTLFPKECWNDLHLQI
IWYGREYSPARGWNLEKDIITKTIGRKAVINEYYKKNAPK
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgactaagaaagagaaatcaacgtttgttataaatacgttaaatgatttataccctgaa
atccccatacctttagaccataaagatgcctatacattattaattgcggttttactttca
gctcaatgtacagatgtaagggtaaatcaaatcacacctttactttttgcaaaagcagat
aatccctacgacatgattaaaatgacggttgaagaaattcaagacatcattagaccttgt
ggactttcaccaatgaaatcgaaaggtatttatggtttatctaaaatactaatagaaaag
cacaatggcgaggttcctcaaaatttcaaggatttagaagaattacctgctgttggacat
aaaacggcaagtgttgttatgagtcaggcttttggtatacctgcttttccggttgatacg
catattcatcgattaatgtaccgttggggattatcagatgggaaaagtgtagaaaaaaca
gaaaaagacgctaagactttatttccaaaagagtgttggaatgacttacaccttcagata
atttggtatggcagagaatattctcccgctaggggatggaatttagaaaaagatatcatc
accaaaaccattggaaggaaagcagtaataaatgaatactataaaaaaaatgctccaaaa
taa
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