Candidatus Filomicrobium marinum Y: BN1229_v1_3833
Help
Entry
BN1229_v1_3833 CDS
T03857
Name
(GenBank) RND transporter
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
fiy
Candidatus Filomicrobium marinum Y
Pathway
fiy01501
beta-Lactam resistance
fiy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
fiy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BN1229_v1_3833
01503 Cationic antimicrobial peptide (CAMP) resistance
BN1229_v1_3833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fiy03036
]
BN1229_v1_3833
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fiy02000
]
BN1229_v1_3833
01504 Antimicrobial resistance genes [BR:
fiy01504
]
BN1229_v1_3833
Chromosome and associated proteins [BR:
fiy03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
BN1229_v1_3833
Transporters [BR:
fiy02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
BN1229_v1_3833
Antimicrobial resistance genes [BR:
fiy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BN1229_v1_3833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
BSH_CzcB
BSH_RND
Beta-barrel_RND_2
HH_MFP_RND
CzcB_C
RND-MFP_C
BSH_CusB
BSH_YknX
Biotin_lipoyl
BSH_LcnD
DUF4407
Motif
Other DBs
NCBI-ProteinID:
CPR22400
UniProt:
A0A0D6JL88
LinkDB
All DBs
Position
1:complement(3745888..3747183)
Genome browser
AA seq
431 aa
AA seq
DB search
MKKWLLLIAVVAVLSAGGYAYVYGDLQKQLAEKFAPSKTDNKSADKSSKETTEEQSSSSK
AVAPEDSAIAVSVAVVQPALFVETVMVTGSLVAREQIFVAAEIEGQRIVELSAEEGDYVK
KDDLLATLESEALSAQRAQITATIARADAAIDRAKSLIVESEARLDEAEAELKRATPLRS
SGYLSESTYDQRRATARTARAQLTAAKHGLVLAEAEKNQAGAQGRELDWKLSKTEIRAPT
SGLISRRTARIGGLVSSTKDPLFLLVSDAEIELDAEVPETKLTRLKIGQKAQISASGGPM
VEGTVRLISPEVDIASRLGHVRIFLGANPNLRVGAFARGTIETSRTNGLAVPQSAVLYET
SDTAQRPMVQRIVEGKVETVEVEIGSIAAGFMEITSGLTEGDVVVAKSGTFLRNGDHVRP
IKPSPKISEAN
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtggcttctactgatcgcggtcgtggccgtgctttccgccggcggctacgcc
tacgtctacggcgatctgcaaaagcagttggctgagaagttcgcgccatccaaaaccgat
aacaaatccgcagataaatcgagcaaagaaacaaccgaagagcaatcctcttcctccaag
gccgtagcgcctgaggattcggcaattgcagtttcagtggcggtagtccaacccgcactg
tttgtcgaaaccgttatggtcacgggctctcttgttgcccgcgagcaaatcttcgtggcg
gcggaaatcgaaggccagcggattgtggagctttcggccgaagagggtgactacgtaaag
aaagacgatctgctcgcgacactcgaaagcgaggcgctctcggcccaacgcgcccaaatc
acggcaaccattgcacgtgccgatgctgccatcgaccgagccaagagcctgatcgtggaa
tctgaagcgcgcctcgatgaagcggaagccgagttaaaacgcgcaacgccattgcgctcc
tccggatatctttccgagagcacatatgaccagcgccgggcgacagcacgtaccgcgcga
gcccagctgacggcagccaagcatggcctggtcctcgccgaagccgagaagaaccaagct
ggagctcagggccgggaactggattggaaactatcgaagacggaaattcgagccccgacc
agcggcctgatctctcgccgcaccgcgcgcatcggcggcctcgtttcgagcacaaaggac
ccgttgttcctgcttgtctcggatgccgagattgaactcgacgccgaagtgcccgaaacc
aaactcacgcgcttgaaaatcggacagaaagctcagatcagcgcatccggcggaccaatg
gttgaagggaccgtccgccttatctcaccagaggtcgacatcgcctcaaggctcggtcac
gtccgtatctttcttggcgcaaacccaaacttgcgtgttggagcttttgcgcgcggaacc
attgaaacgtcacgcacaaacggattggcggtcccacagtcagcggtactgtacgagaca
agcgataccgcacagcgccctatggtccagcgcattgtggagggcaaggtggaaaccgtc
gaggtagagatcggctctattgccgccgggtttatggagatcacatccggtcttacggaa
ggtgacgtcgtcgtcgccaaatccggaacatttctgcgcaatggcgaccacgtcagacca
atcaagccctcacccaaaatcagtgaggcaaactaa
DBGET
integrated database retrieval system
