Candidatus Filomicrobium marinum Y: BN1229_v1_3968
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Entry
BN1229_v1_3968 CDS
T03857
Symbol
murE
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
fiy
Candidatus Filomicrobium marinum Y
Pathway
fiy00300
Lysine biosynthesis
fiy00550
Peptidoglycan biosynthesis
fiy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fiy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BN1229_v1_3968 (murE)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BN1229_v1_3968 (murE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fiy01011
]
BN1229_v1_3968 (murE)
Enzymes [BR:
fiy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
BN1229_v1_3968 (murE)
Peptidoglycan biosynthesis and degradation proteins [BR:
fiy01011
]
Precursor biosynthesis
Amino acid ligase
BN1229_v1_3968 (murE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
CPR22535
UniProt:
A0A0D6JLL3
LinkDB
All DBs
Position
1:3869777..3871270
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AA seq
497 aa
AA seq
DB search
MQLSHLLEPEISVPPGAKEIFIRGLSLDSRTVSPGFLFAALPGARADGAQFVGKAVEAGA
AAVLVGTGADVGELSVPVLRTDNPRRTLARIAARFYGAQPDVAVAVTGTSGKTSVVEFTR
QIFASQGLKAASLGTIGLVKPDGGVYGSLTTPDPLSLHQSLAGLADEGVTHIAFEASSHG
LDQHRLDGVKLTAAAFTNLGRDHLDYHTDTEAYFVAKMRLFTELLAKGQPVVINMDGARS
GDVRDVARACGLDVRTVGRDGETIRLLEAIPEGFAQRLHLAVGGEEVSIRLPLVGGYQVE
NALVAAGLAAATGLDIKACAQALEGLTGVKGRLDIVGEVRGGLVVVDYAHKPEALAAALD
AVRPMAAGRVVCVFGCGGDRDAGKRPIMGAIAAEKADVVIVTDDNPRSESAVAIRAAVLV
GVGTSSSAIVREIGDRREAIEAAITDLGRGDIVVIAGKGHETGQIIGDCVLPFSDHDVAE
GAIENNFGEVRRIPRGS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgcagctctcccatcttctcgaacctgaaatttccgtgccgcctggcgcgaaagagatc
tttattcgcggattgagcctggatagccggacggtttctccgggctttctgttcgcggcg
ttgcccggtgcgcgtgccgatggcgcgcagtttgtcggcaaggcggtggaagcgggggcg
gctgcggttcttgtcgggactggagcggatgtcggtgagttgagtgtgccggtcctccgc
acggataacccgcggcgtacccttgcgaggatagcagcgcggttctatggcgcgcagcca
gatgtggccgtcgcggttacaggaaccagcggcaaaacctccgttgtggaattcacgcgc
cagatttttgcgtcgcaaggcctcaaggcagcgtcgctgggcacgattggcctcgtgaag
ccggatggcggtgtttatgggtctttgacgacgccagaccctctaagcctgcatcaaagc
ctcgcggggcttgcggacgagggcgtcacgcatatcgccttcgaggcgtcttcgcatggt
cttgatcagcatcgcctcgatggtgtgaagctgactgccgctgcgttcacaaatctgggg
cgggatcatctcgattatcacactgataccgaagcttatttcgtagccaagatgcgtctt
ttcacagagcttttggccaaggggcagcctgtcgtcatcaatatggatggcgcccgtagc
ggcgacgttcgcgatgttgcgcgtgcatgcgggctcgatgtgcgtacggttggccgcgac
ggggagacgatccgtttgcttgaggcgatcccggagggatttgcgcaacgtctccatctg
gctgttggtggtgaggaggtttcgattcggttgcctctggtcggtggttatcaggtcgag
aatgccttggtggcggcggggcttgcggctgcgacaggtctcgacattaaggcttgcgca
caggcgcttgagggtttgacgggtgtgaaagggcgcctcgacatcgtgggtgaagtccga
ggtggtttggtggtcgttgactatgcgcacaagccagaggcccttgcagcggcgctcgat
gcggtgcgacccatggctgccggtcgtgtggtatgtgttttcggttgcggtggggaccgg
gatgctggaaagcggcccatcatgggggcgattgcagcggagaaggctgatgttgtgatc
gtgacagacgacaacccgcgtagtgaatcggcagtggccatccgtgctgctgtgctcgta
ggcgtcgggacctcatcaagcgcgatcgtcagggagatcggggatcgccgcgaggccatc
gaggcggccatcacggatcttggacgcggcgatattgtcgtgattgcgggcaagggtcac
gaaaccggccagatcatcggtgattgcgttctgccgttctctgatcatgacgtcgcggag
ggggcgatcgaaaacaattttggcgaagtcagaaggataccgcgtggaagttga
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