Candidatus Filomicrobium marinum Y: BN1229_v1_3980
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Entry
BN1229_v1_3980 CDS
T03857
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
fiy
Candidatus Filomicrobium marinum Y
Pathway
fiy00540
Lipopolysaccharide biosynthesis
fiy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fiy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
BN1229_v1_3980 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
fiy01005
]
BN1229_v1_3980 (lpxC)
Enzymes [BR:
fiy01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
BN1229_v1_3980 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
fiy01005
]
Lipid A
BN1229_v1_3980 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
CPR22547
UniProt:
A0A0D6JLJ3
LinkDB
All DBs
Position
1:3885603..3886547
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AA seq
314 aa
AA seq
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MSNRFIGARQTTIAREIELTGTGVHSGAPVSVSLHPAEADTGLRFLVTKRGRVIADIPAS
VQQVKNLTLCTVIGDDHGNTVSTVEHLLAALRGLSIDNCYIEIDSKEVPIMDGSSAMFVE
AIDEVGVTELQTPRTYIKVLKPIRVEDGDCFGEIMPHSGFHLDIEIDFDTPLIGRQRLAY
EMTPGVFRNELSRARTFGFMSDVERLWKNGLALGANLNNTVAIGDDKVMNPEGLRYPEEF
VRHKMLDAVGDLSLAGHPLLCKYRSVRGGHRLNASVLQALLADEYAWTIVHAPRVRDVVP
VNVSFPEVFAEGTH
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcgattcatcggcgcgcgtcagactacaattgcgcgcgagatcgagctcaca
ggcacgggggtgcacagtggagcgccagtatcggtttcgcttcatccagcagaagctgat
actggcctccgtttcttagtcacgaaacgcggtagagtcatcgcagacatccccgctagc
gtgcagcaagttaaaaatctaaccttatgtacggttatcggcgacgatcacggcaatact
gtgagtaccgtcgaacatcttcttgccgctcttcgcggactttccatcgacaactgctac
atcgagatcgatagcaaggaagtgccgatcatggacggtagttccgccatgttcgtcgag
gcgatcgatgaggttggggtaactgagcttcagactccacggacctacatcaaagtcttg
aagcctatccgagtcgaagatggtgattgtttcggcgaaattatgccgcactcgggcttc
catctcgacatcgagattgatttcgacacgccgcttattggccgtcagcgcctcgcttac
gaaatgacgccgggtgtgttccgcaatgagctgtcgcgggcacgtacgttcggtttcatg
agtgatgtcgaaaggctctggaagaacggtttggctctgggtgccaacctcaacaacacg
gtggcgatcggcgacgataaggtgatgaaccctgaggggcttcgatatcctgaagagttc
gtgcgtcacaaaatgctcgatgcggttggtgatctttcgttagctggccatccgctgctc
tgcaaataccgttcagttcgtggtggtcaccgcctgaacgcttccgttttgcaggcgctt
ctcgcagacgaatatgcatggaccatcgttcacgctccgcgcgtccgcgatgttgtccct
gtcaatgtcagcttccctgaagtttttgccgaaggtacgcattaa
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