Flavobacterium anhuiense: BB050_03635
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Entry
BB050_03635 CDS
T04718
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
fjg
Flavobacterium anhuiense
Pathway
fjg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fjg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BB050_03635 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fjg03400
]
BB050_03635 (pdg)
Enzymes [BR:
fjg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BB050_03635 (pdg)
DNA repair and recombination proteins [BR:
fjg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BB050_03635 (pdg)
Prokaryotic type
BB050_03635 (pdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Ogg-HhH
HHH
Ribosomal_S13
HHH_5
EndIII_4Fe-2S
DUF4460
Motif
Other DBs
NCBI-ProteinID:
AOC96717
UniProt:
A0AAC9D524
LinkDB
All DBs
Position
complement(4280848..4281498)
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AA seq
216 aa
AA seq
DB search
MDLFGENADWEIKLKPILKKYKGKKHPLEYHSIYQLLVMVILSAQDSDANINTIAPKLFE
KYPTLKSISQTDLETFTSYVTKVRNHSTKAKWILEIAKIIKNDTDIPLNMSDLTALKGIG
RKSANVILREANKPAEGIIADLHVIRVAPRIGIIKESKDGNKVEKDLMQVLPKNIWSEIG
MAISFHGREICRPKPKCPECVLTDICLYYNTLVIKN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggatttatttggagaaaatgcagattgggaaattaaattaaagcccattttaaaaaaa
tataaaggaaagaaacatcctctggaatatcatagcatttatcaattgcttgtcatggtt
attctctctgcgcaagattctgatgccaatataaatactatagcgccaaaattattcgaa
aaatatccaacattaaaaagtatatctcaaaccgacctagaaacttttacatcttatgta
actaaagtccgtaatcattctacaaaagcaaaatggattttagaaattgctaaaatcatt
aaaaatgataccgatattcctttaaatatgtccgatcttactgctttaaaaggaattggg
agaaaatctgcgaatgtcattttaagagaagccaataaacctgcggaaggcattattgcc
gacttacatgttatacgcgttgctcccagaatcggaattataaaggaaagcaaagacgga
aataaagtagaaaaagacttaatgcaagtccttccaaagaatatttggtcagaaatcgga
atggcaatttcgtttcatggccgagaaatttgcagaccaaaacctaaatgccctgaatgt
gtcttaaccgatatttgcttgtactataatactctggtaatcaaaaactaa
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