Flammeovirga kamogawensis: KM029_15385
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Entry
KM029_15385 CDS
T07412
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
fka
Flammeovirga kamogawensis
Pathway
fka03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KM029_15385 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fka03400
]
KM029_15385 (nth)
Enzymes [BR:
fka01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KM029_15385 (nth)
DNA repair and recombination proteins [BR:
fka03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KM029_15385 (nth)
Prokaryotic type
KM029_15385 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
QWG06679
LinkDB
All DBs
Position
1:complement(3803876..3804544)
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AA seq
222 aa
AA seq
DB search
MNKQEKVQDIVKTLQGLYPNPPIPLDHKDPFTLLVAVALSAQCTDERVNKITPLLFAKAD
NPYDMAKLTVEEIREIIKPCGLSPMKSKGIYGMSNIIIDKFGGEVPQNFKDLESLPAVGH
KTASVVMSQAFGFPAFPVDTHIHRLMYRWGLTNGKNVEQTEKDAKRLFDEKDWNDLHLQI
IYFGREYCPAQRHDPNECPICSKHGRKTLFIEKKSTKKKKTK
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcaagaaaaagtacaagacatagttaaaacgttacagggattatatccaaac
cctccaattcctttagatcataaagatccgtttactttattagttgctgttgctctttct
gcacaatgtacagatgaacgtgtaaataaaattacacctcttctttttgctaaggcagat
aatccctacgatatggctaaactcaccgtagaagaaataagagagattatcaaaccttgc
gggctttcgcctatgaaatctaaaggcatatatggtatgtctaatataataattgataag
tttggaggagaggttcctcaaaattttaaagatttagaatctttgccagctgtcgggcac
aaaactgcgtctgtagtaatgtcacaagcatttggttttcctgcttttcctgttgataca
catattcataggctaatgtacagatggggattaacgaatggaaaaaacgttgaacagaca
gaaaaagatgctaaacgactttttgatgaaaaagattggaatgatttgcacttacagatc
atttactttggcagagaatactgccctgcgcaaagacatgacccaaatgagtgccctatt
tgctctaagcacggtagaaaaacattatttattgaaaaaaaatcaacaaaaaagaaaaaa
actaaataa
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