Fusarium keratoplasticum: NCS57_00869900
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Entry
NCS57_00869900 CDS
T09757
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
fkr
Fusarium keratoplasticum
Pathway
fkr03018
RNA degradation
fkr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fkr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCS57_00869900
09123 Folding, sorting and degradation
03018 RNA degradation
NCS57_00869900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fkr03019
]
NCS57_00869900
03041 Spliceosome [BR:
fkr03041
]
NCS57_00869900
Messenger RNA biogenesis [BR:
fkr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NCS57_00869900
mRNA degradation factors
5'-3' decay
Lsm complex
NCS57_00869900
Spliceosome [BR:
fkr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
NCS57_00869900
Complex C
U2 snRNP components
NCS57_00869900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
77686965
NCBI-ProteinID:
XP_052912339
LinkDB
All DBs
Position
6:2303053..>2303569
Genome browser
AA seq
96 aa
AA seq
DB search
MADVGEESHHVSEPLDLVRLLLNEVVFVKLRGDRELKGKLHAYDSHCNLVLGEVEETIYT
VDEDDEDDEVKTISRKSEMLFVRGDSVVLISPGVPF
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtcggtgaagaatcccaccatgtgtcggagcccctcgacctcgtcaggctc
ctgctcaacgaggtcgtctttgtgaagcttcgaggagaccgagaactcaagggaaagctg
catgcttacgatagtcactgcaacctggtgctgggagaggttgaggagacaatctacaca
gtcgacgaggatgatgaggacgacgaggtcaagaccattagccggaaatctgaaatgctc
tttgtgagaggtgatagtgtggtcctcatttcaccaggggttcctttctag
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