Fusarium keratoplasticum: NCS57_00878400
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Entry
NCS57_00878400 CDS
T09757
Name
(RefSeq) DNA ligase
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
fkr
Fusarium keratoplasticum
Pathway
fkr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
fkr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NCS57_00878400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fkr03400
]
NCS57_00878400
Enzymes [BR:
fkr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
NCS57_00878400
DNA repair and recombination proteins [BR:
fkr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
NCS57_00878400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
RNA_ligase
BRCT
DNA_ligase_A_C
LIG3_BRCT
RTT107_BRCT_5
mRNA_cap_enzyme
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
77687050
NCBI-ProteinID:
XP_052912419
LinkDB
All DBs
Position
6:2603640..2606664
Genome browser
AA seq
991 aa
AA seq
DB search
MGSQREERAQTEDAKHEDEIQYGTVGMTQEEMEEKYPNRPKNHSKTLVFSELFRELFNPL
SENKKQNATGAGPRKAFRGVNKLSPHEQRRHIIERFIVRWRKEVGPDFYPALRLILPDKD
RDRGVYGLKENAIGKLLVKLMKIDKSSEDGYNLLHWKLPGQTTASRLAGDFAGRCFEVIS
KRPMRTTVGNMTIAEVNEQLDKLAASTGEAENLRVFEIFYNHMNAEELMWLIRIVLKQMK
VGATEKTFLDLWHPDGDALFGVSSSLRRVCWELSDPEIRLEQDEAGVALMQCFQPQLAQF
QMPASFQKMIQLLRPTEEDPEFWIEEKLDGERMQMHMVEDKKHPGGRRFCFWSRKAKDYT
YLYGDGLQDENSSLTRHLKKAFASGVKNLILDGEMITWDMGVDKIVPFGTLKTAAISEQQ
NKSDTDSAGHRPLFRVFDILYLNNKPLTQYTLRDRHRALEKAVKSVHRRLEIHKYTSATT
SDAIEPLLREVVANASEGLVLKNPRSMYRLNHRNDDWLKVKPEYMSEFGESLDCVIIGGY
YGSGKRGGMLSSYLCGLRVTQNHIQAGANPEKCFSFFKVGGGFRAEDYAEIRHRTEGKWI
EWDQKNPPSEYIELGGGELRQYERPDMWIRPKDSVVVSVKAASVGPSDQFARGFTLRFPR
FRRLRLDRTWDTALSLEEFQELKDRVDEESKEKAMTVEDRKRRNPKRIKRELVIAGEDSA
PVEFEGEKTKLFEGLEFCVLSEALKPYKKTKTQLETIIKEHGGTISQRAAPGTNMLLIAD
KKVVKVASLMKGGDVDLIRPKWIKDCLEQDLGQFLLPFEESHLFHATEAMKRAAEQNTDQ
FGDSYARDMSIDELKDLMDCMPKIEDEEPFDKNEFLQQLEEHGKDLGNLRSFIFRRCVVL
FHGVDIGANRVSRLKHFVKYGGGSVTEDAGDLTVTHVVIEGGDPMQVGEAADMVRKELSS
RRTQPRVVNGKWIDDCWKEGTLLDEEQFVVP
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtcagcgagaagagagggcccaaaccgaggatgcgaaacatgaagacgagatc
caatacggtacggtgggcatgacacaggaggaaatggaagaaaaatatccgaaccgccca
aagaatcactcaaagaccctagtcttctctgagctgtttcgagagttgtttaatccatta
agcgaaaacaagaagcaaaatgccaccggcgcaggccctagaaaagcctttagaggtgtc
aataagctctcaccgcacgagcagcgacgacacattatcgagcgcttcattgtgcgatgg
cgcaaagaagtcggtcccgatttctaccctgccctacgtctaattctccctgataaggat
cgcgaccgaggtgtttacggcctcaaggagaatgccataggaaagctccttgtgaagttg
atgaagatcgacaagagctctgaggatggctacaatcttttgcactggaagttgcctggt
caaaccactgcctctcgcctggctggtgactttgctggacgatgtttcgaggtcatttcg
aagcgcccgatgcgcacaaccgtcggcaacatgacaatcgccgaggtgaacgagcagctg
gataagcttgctgcgtctacgggagaggcagagaacctgcgtgtctttgagattttctac
aaccacatgaacgctgaagagttgatgtggcttatccggatcgtcttgaagcagatgaag
gtcggtgccacggaaaagacctttttggatctctggcatccggacggcgatgcccttttc
ggcgtctcttcgagtttaaggcgagtgtgctgggaactctccgaccccgagattcggctc
gagcaggatgaggcgggtgttgccctcatgcaatgcttccaaccgcaacttgctcagttc
cagatgcctgcgtcttttcagaagatgattcagcttctccggccaacagaggaagatccc
gaattctggattgaggaaaagctggatggcgagcgcatgcaaatgcacatggttgaggac
aaaaagcaccccggcggtcggaggttttgcttctggtcaagaaaggccaaagactacacg
tacctttacggcgacggacttcaagacgagaactcgagtttgacacggcatctcaagaag
gcgttcgcatcaggtgtcaagaatctgattctggacggcgagatgattacctgggatatg
ggagttgacaagatagtccctttcggcactctcaagacggctgctatctcagagcagcag
aacaagtcggatacggactcggctggtcatcgtcccctattcagggtctttgatatcctc
tacctcaacaacaagcccttgactcagtacacgctgcgagatcgacatcgcgctctcgaa
aaggccgtcaaatctgttcatcgacgtcttgaaatccacaaatacaccagcgcaacaact
tctgacgctattgagccactcctccgcgaagtcgtggccaacgcttcagagggccttgtg
ctcaagaaccctcgctccatgtaccgtctcaaccaccgaaacgatgactggctcaaggtc
aaacctgaatacatgtctgaattcggcgagtccctcgactgtgtcattatcggtggctac
tacggctcagggaagcgcggtggaatgctttcgagttacctgtgcggtctacgagtgaca
caaaatcatatccaagctggcgcaaatcctgaaaagtgcttcagtttcttcaaggttgga
ggtggattccgcgccgaggactacgcagaaattcgacatcgaacagaaggaaagtggatt
gagtgggatcaaaagaacccgccctcagaatacattgagcttggtggaggtgagctcaga
cagtatgagcggccagacatgtggattcgtcccaaagactcagtcgttgtttcagtgaaa
gcagcgagcgttggcccctcagaccagtttgctcgtggattcactctgcgcttcccacga
ttcaggcgtctccgtttggatcgaacatgggacactgccctctccctagaggagtttcag
gagctgaaagaccgagttgacgaagagtcaaaagaaaaggccatgacggttgaagacaga
aagagacggaatcctaaacgaatcaagagggagcttgttatagctggagaggattcagcg
ccggtcgagtttgaaggcgagaagacgaagctctttgaagggttggagttttgcgtcctt
tctgaagctctgaagccctataagaagacaaaaactcaactcgagaccatcatcaaagaa
catggaggcacaatttcccaaagagcggcaccaggtacaaacatgctgcttattgccgac
aagaaggtggttaaggtggcgagtctcatgaagggaggagacgtggaccttattcgtccc
aaatggatcaaagattgcctggagcaggatttgggacaattcctgctgccgtttgaggag
tcacatttgtttcacgctacggaagcgatgaagcgggcggcagagcaaaacacggatcag
tttggagacagctacgctcgagatatgtctattgatgagctcaaggatctgatggactgt
atgcccaagatcgaggacgaggagccattcgacaagaatgagtttttacagcagcttgaa
gaacacggcaaagacctgggcaacttgaggagcttcattttccggcgctgcgtggtgttg
ttccatggggttgacattggtgccaatcgggtctctcggttgaagcactttgtcaagtat
ggtggaggaagtgtcaccgaggacgcaggcgacttaactgtgacacatgtcgtgatagaa
ggaggagatccaatgcaagtgggtgaggcggccgatatggtgcgcaaggagctgagctcc
agacgcacacaaccgagggtggtgaatggaaaatggattgacgattgctggaaggagggc
acattgcttgatgaggagcagtttgtggttccatga
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