Flavisolibacter tropicus: SY85_17825 Help Entry SY85_17825        CDS       T04392                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism fla  Flavisolibacter tropicus Pathway fla03030   DNA replication fla03410   Base excision repair fla03420   Nucleotide excision repair fla03430   Mismatch repair Brite KEGG Orthology (KO) [BR:fla00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     SY85_17825    03410 Base excision repair     SY85_17825    03420 Nucleotide excision repair     SY85_17825    03430 Mismatch repair     SY85_17825  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:fla03032]     SY85_17825    03400 DNA repair and recombination proteins [BR:fla03400]     SY85_17825 Enzymes [BR:fla01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      SY85_17825 DNA replication proteins [BR:fla03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      SY85_17825 DNA repair and recombination proteins [BR:fla03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      SY85_17825    NER (nucleotide excision repair)     GGR (global genome repair) factors      SY85_17825    MMR (mismatch excision repair)     DNA ligase      SY85_17825   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       SY85_17825 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT HHH Nlig-Ia BRCT_2 Zn_ribbon_IS1595 DUF4796_N Motif Other DBs NCBI-ProteinID:  ANE52075 UniProt:  A0A172TYB8 LinkDB All DBs Position complement(4184009..4186096) Genome browser AA seq 695 aa AA seqDB search MTDRVKELQQHTVALLKTAKAEGITPSAINTLREVLRFHEYRYYIQNDPLVSDFEYDTLY KSLEKLETENPDLITSDSPTQRVGKGLTKEFPTVQHLVPMLSLDNSYNSDDLLDFDRKAR ELTGESVIEYCVEPKFDGASISLLYEDDRLVRGATRGDGVYGDDITPNIRQIRTIPLSAH FATYGLDTVEIRGEVLINKNNFAKFNEAVVEAGGQPLANPRNAASGTLRIKDPLEVGRRK LEAFTYSLGYFSILPGHEGPHTHSETLEMLWNLGFRSPNKEKKVFNGIQAVIDYCTEFEA HRDDLPYEIDGMVIKVNRFDLQDKMGMTTHHPRWAIAYKFKARQATSKLLRVEYQVGRTG NIGPVAKIEPVAIGGVTVSSISLFNEDNIRDKDLRIGDTVLVERAGDVIPYIVKSMHELR TGNEQVIQFPRNCPACGDELYRAEEEAAWRCTNINCSAQVLERLFHFASKDAMDIRGLGE ANIEKFYNLGLLCTIPQIYQLDYEKIGTLEGFGPKSITNLQTAIANSKNQPLHRLMFALG VRHVGETMAKTLAHAVNHLLDLQRFTEADLMNLEDVGPKVANSVFTFFQNDDNIKMLQEL EGLGLQLVNAKKDFGNGGNLEGQTFLFTGSMVKLKRSEAEALVEENGGKIVSGVSSKLNY LVVGEDAGSKLEKAKKITSIKIITEDQFLRMIGKV NT seq 2088 nt NT seq  +upstreamnt  +downstreamnt atgacagaccgcgtaaaagaattacaacagcacacagtagccctactaaaaactgccaaa gcagaaggcattactccctctgctatcaataccctgcgtgaagtactccgttttcatgag taccgctattatatacaaaacgacccgctggtctctgactttgagtacgataccctgtac aaaagtttggaaaagctggaaaccgaaaaccccgacctgatcacttccgattcacccact cagcgtgtgggtaagggattgaccaaggagtttccaacggtgcaacatttggtacccatg ctgtcgttagacaactcttataacagtgatgacctgttagactttgaccgtaaagcacgg gaactaactggtgagtcggtcattgaatattgtgtagagcccaagtttgacggagcctct atatcactcctatatgaagacgaccggctggttcgtggcgccacacgcggtgatggcgta tatggggatgatattacacccaacattcgccagatccgcaccattcccttaagtgcgcac tttgctacttatggtttagacaccgtagagatccgcggagaggtactgatcaacaagaac aattttgccaagtttaatgaagctgtagtagaagctggtggacagccattagccaatcca cgtaatgcagcgtctggtaccttacgtattaaagaccctttggaagtgggccgtcgtaag ttggaagcttttacatatagcctgggttacttctctatcctaccgggacatgaaggacct catacgcactccgaaacattggagatgctgtggaacctgggtttccgcagtcccaataaa gaaaagaaggtattcaacggcatacaagctgtaatcgattattgtaccgagtttgaagca caccgtgatgatctgccttatgaaatagatggcatggtgatcaaggttaaccgctttgac ctacaggataaaatgggtatgaccacccaccaccctcgctgggccatagcctacaagttc aaagctcgtcaggccaccagcaaacttcttagagtagaatatcaggtaggtagaactggt aatattggccctgtagccaagatagaaccggtagctataggtggtgttaccgtttcttct atttccttatttaacgaagacaatatccgtgataaggatcttcgtataggcgataccgta ttagtagagcgggctggcgatgtgataccttatattgttaaatccatgcatgagttacgc accggtaatgaacaagtcattcagtttccccgtaactgtccagcttgtggtgatgagtta taccgtgcggaggaagaagcggcctggcgttgtacaaacatcaactgttcagcccaggtg ctagagcgcctcttccattttgcctcaaaagatgctatggacattcgtggcttgggtgaa gctaatattgagaagttttataatctgggactgttgtgcaccataccacagatttaccag ctggactatgagaaaataggaacccttgaaggctttggtcccaaatcaattactaatctg caaacagcaattgccaactccaagaatcaacctttacaccgattgatgtttgccctgggc gtgcgccatgtaggtgaaacgatggctaaaaccttagcgcatgcagtgaaccatctgctt gacctacagcgctttacagaggctgacctgatgaatttagaagacgtaggccccaaggtt gctaacagtgtatttacctttttccagaacgatgacaacattaaaatgttgcaggaactg gaaggtttaggtctgcagttagtaaatgccaagaaggattttggcaatggtggcaacctg gaaggacaaacgtttttgttcactggttcaatggtcaaattaaaacgcagtgaggctgaa gcgttagtagaagagaatggcggaaagatcgtgtctggcgtaagcagcaagctcaattat ttagtggttggagaggacgctggaagcaagttagagaaggcaaagaagattacttcaatc aaaataattacggaagatcaatttttgaggatgattggcaaagtttag

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