Flavihumibacter fluvii: KJS93_19655
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Entry
KJS93_19655 CDS
T07958
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
flc
Flavihumibacter fluvii
Pathway
flc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
flc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KJS93_19655 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flc03400
]
KJS93_19655 (nth)
Enzymes [BR:
flc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KJS93_19655 (nth)
DNA repair and recombination proteins [BR:
flc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KJS93_19655 (nth)
Prokaryotic type
KJS93_19655 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
DUF2400
DUF7178
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ULQ52306
LinkDB
All DBs
Position
4534602..4535273
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AA seq
223 aa
AA seq
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MTTKERYQQVIAYFTKTAPDAETELLYDNPFQLLVAVVLSAQCTDKRVNQTTPALFSRFP
TAAALAASTPEEVLPYIKSISYPNNKARHLVGLGTMLQEKFKGHVPMTVDELVQLPGVGR
KTANVITSVVDAQPNMAVDTHVFRVSERIGLTTRAKTPLAAEKQLVKHLPKEFVHIAHHW
LILHGRYICTARSPKCQSCGLQDACRFFKRQIVKATSKTTHGK
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaaaagagcgttaccagcaagtaatagcgtattttacaaaaacggcccccgac
gccgaaacggaattattatatgataacccgtttcagcttttggtggccgttgttttatcc
gcccaatgcaccgataaacgagtcaaccagaccacacctgcacttttttccaggtttccc
acagcagcagcattggccgcttcaaccccggaagaggtattgccatatataaaaagcatt
tcctatccaaacaataaagccaggcatttggtcggacttggtacaatgcttcaggaaaag
tttaagggccacgtaccgatgactgtcgatgaacttgttcaattgcccggagttggccgt
aaaaccgccaatgtcatcacatctgtagtggatgcacagcctaatatggcagttgacacc
catgtttttcgagtgtctgaaagaattggtctgaccacccgtgcaaaaacaccgttagcg
gctgaaaaacaactggttaaacatttgccaaaagaatttgtccatatcgcacaccattgg
ctgatacttcatggccggtatatatgtacagcaagatctcctaaatgccaatcgtgtggt
ttacaagatgcctgccgctttttcaaaaggcagatagttaaagctacaagcaaaaccact
catggtaaatag
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