Ferribacterium limneticum: KI610_16365
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Entry
KI610_16365 CDS
T07599
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
fle
Ferribacterium limneticum
Pathway
fle03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KI610_16365 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fle03400
]
KI610_16365 (nth)
Enzymes [BR:
fle01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KI610_16365 (nth)
DNA repair and recombination proteins [BR:
fle03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KI610_16365 (nth)
Prokaryotic type
KI610_16365 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UCV18357
LinkDB
All DBs
Position
3438771..3439403
Genome browser
AA seq
210 aa
AA seq
DB search
MKKANIEQFYSRLRDANPAPTTELHYATPFQLLIAVILSAQATDVGVNKATARLYPVAPT
PSAMLALGEEGLTEYIKTIGLYRTKAKNVIATCRMLLELHDGEVPDDRAALEALPGVGRK
TANVVLNTAFGQPTIAVDTHIFRLGNRTGLAPGKTVEEVEKKLLKVTPEEFKKDAHHWLI
LHGRYVCKARKPDCGRCVVLDLCSYRSKSV
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaagccaatatcgagcagttctacagccgcctgcgcgacgccaatccggcgccg
acgaccgagctgcactacgccacgcccttccagttgctgatcgccgtcattttgtcggcg
caggccaccgacgtcggcgtcaacaaggcgacggcgcggctctacccggtcgcgccaacg
ccatccgccatgctggcgctcggcgaagagggcctgaccgaatacataaaaaccatcggc
ctgtaccgcaccaaggccaaaaacgtcatcgccacctgccgcatgctgctcgaactgcac
gacggcgaggtgccggacgaccgcgcggccctcgaagccctgcccggcgtcggccgcaag
acggccaatgtcgtgctcaacacggctttcggccagccgaccatcgccgtcgacacgcac
attttccgcctcggcaaccgtaccgggctggcccccggcaagacggtcgaagaagtcgaa
aagaagctgctcaaggtgacgccggaagaattcaagaaggacgcccaccactggctgatc
ctgcacggccgctacgtctgcaaggcgcgcaagccggactgtggccgctgcgtcgtgctc
gacctgtgcagctaccggagcaagagcgtatga
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