Flammeovirga sp. MY04: MY04_1778
Help
Entry
MY04_1778 CDS
T04442
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
flm
Flammeovirga sp. MY04
Pathway
flm00300
Lysine biosynthesis
flm00550
Peptidoglycan biosynthesis
flm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MY04_1778
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MY04_1778
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
flm01011
]
MY04_1778
Enzymes [BR:
flm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
MY04_1778
Peptidoglycan biosynthesis and degradation proteins [BR:
flm01011
]
Precursor biosynthesis
Amino acid ligase
MY04_1778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Glyco_hydro_59M
YqeC
Motif
Other DBs
NCBI-ProteinID:
ANQ49152
LinkDB
All DBs
Position
1:2212745..2214199
Genome browser
AA seq
484 aa
AA seq
DB search
MRNIQTLLKGIEFELIKGDLNQLVSDVQIDSRQLTADSAFIAIKGTQMDAHKFIPKAIEL
GAKTIILEDEPSDLIDGVSYIQVNNTSQVAGLIASNFYDNPSDNIKVIAITGTNGKTTVV
TLLQNLFIKLGYNTGALTTIENKINNEVIPTKLTTPDPVTLQRLLAEMVKKNCSYCFMEA
SSHAIVQGRLSGINLTGAIFSNISHDHLDYHGTMKEYINAKKRLFDTLPKNAFALVNVDD
KRGPVMLQNCKGKHVTFGLHTMANYKGKLIDNTFEGIQMDINGQEAWFQLIGSFNAYNIL
TAYATAICLDEEPMETLQCLSELRPARGRFEQLVSKKNVRGIIDYAHTPDALENVLETIK
DIKEDGENIITVVGCGGDRDKSKRPVMAKTAAMLSEKVILTSDNPRTEDPEVILEEMMDG
ISPTQERRTQVILDRKEAILKAVEMAEPRDIILLAGKGHETYQEIDGVRHHFDDKEELFK
AFHS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
ataagaaatatacaaacccttttaaaaggtattgaatttgaactcataaaaggagattta
aatcaattagtatccgatgtacaaatagactcacgtcaacttacagctgacagtgctttt
attgccattaaaggcacacagatggatgcacataaatttattccaaaggccattgaatta
ggtgctaaaaccatcattttagaagatgaaccttctgatcttattgatggcgtatcttat
atccaagtcaacaatacgtctcaagttgctggattaatagcttctaatttttatgataat
ccttctgataatatcaaggtaatagctatcactggaacaaatggaaaaacaacagtggtt
acacttcttcagaacctatttataaaattagggtataatactggagcattgacaaccatt
gaaaataaaatcaataatgaagtaatccctactaaacttaccacgccagaccctgtcact
ttacaacgtctattggcagagatggtgaaaaagaactgtagctattgcttcatggaagca
agttcacatgcgattgtccaaggacgtttaagtggaattaaccttacaggtgctattttt
tcaaatatcagtcatgaccatttggattatcatggcacgatgaaagaatatatcaatgct
aaaaaacgattgtttgatactttaccaaaaaatgcgtttgctttggtaaatgtggatgac
aagcgtggtcccgtgatgcttcaaaactgcaaaggcaagcatgtaacttttggtttgcat
actatggcaaattacaagggtaaattaattgacaatacctttgaggggattcaaatggac
attaatggacaagaagcctggttccaacttattgggtctttcaacgcctataatatcctt
acggcttatgctactgcaatttgtcttgacgaagaacctatggaaacattacaatgttta
tccgagttacgacctgctcgcggtagattcgaacagttggtttctaaaaagaatgtcaga
ggaattattgattatgcacatactccagatgctttagaaaatgtcttagaaactatcaaa
gacataaaagaagatggtgaaaatataatcacagtagtaggttgtgggggtgatcgcgat
aaaagtaaaaggcctgtaatggctaaaactgccgctatgttaagcgaaaaagttatttta
acttcagacaatccaagaacagaggatccagaagttattttagaagaaatgatggatggt
atctctcctactcaagagagaagaactcaagtgattttagatcgaaaagaagctattctt
aaagcagtagaaatggccgaacctcgtgatattattcttctagctggaaaagggcacgag
acctatcaagaaattgatggtgtccgtcatcattttgatgataaagaagaactttttaaa
gcatttcactcataa
DBGET
integrated database retrieval system
