Flammeovirga sp. MY04: MY04_2648
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Entry
MY04_2648 CDS
T04442
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
flm
Flammeovirga sp. MY04
Pathway
flm01501
beta-Lactam resistance
flm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MY04_2648
01503 Cationic antimicrobial peptide (CAMP) resistance
MY04_2648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
flm03036
]
MY04_2648
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
flm02000
]
MY04_2648
01504 Antimicrobial resistance genes [BR:
flm01504
]
MY04_2648
Chromosome and associated proteins [BR:
flm03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
MY04_2648
Transporters [BR:
flm02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
MY04_2648
Antimicrobial resistance genes [BR:
flm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
MY04_2648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
HH_MFP_RND
RND-MFP_C
YknX_C
HH_EMRA
BSH_CzcB
CzcB_C
BSH_CusB
HH_YBHG
BSH_YknX
Biotin_lipoyl
Beta-barrel_RND_2
HH_CzcB
SOAR
Motif
Other DBs
NCBI-ProteinID:
ANQ50017
LinkDB
All DBs
Position
1:3307248..3308429
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AA seq
393 aa
AA seq
DB search
MTSNFFRAVLKLVTLFLITNFLMSCGGDEKPTSQLPEIEIPVTEVIVQDVPISKSFVGQV
YGTKDIPIRSRVEGYLEGIHFKEGSRVKKGQLLYTVDPQTYAAEVTMLKSKLAEAEVTLI
RAKNDLARIKPLAEKNAVSKSDLDAAQAEKDAAESMVAAAKANLRMSQIELGYTTIKSPI
SGIIGRTEAKVGEFVGRDPNPVILNTVSRIDSVNVRFYINENDYLRLARYSINNKENERR
QSENEDVNKLDLIFSDNTVYNHKGHFDFLDRNVDANTGAILIQATFPNNEGLIRPGQFAK
VRSTIEIVKDGVLVPQRAVMEFQGKYSVFVVNKEGKVAQRAIKLARHSYKDYFLVREGLK
KGEKIVLEGLQKVREGATIKYKVVQFESQHEGA
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgacatctaatttctttagagccgttttaaaactagtaacgctctttctgattacaaac
tttttgatgagttgtggaggagatgagaaacctacatctcaacttcctgaaatcgaaatt
cctgtaacagaagtgatcgttcaagatgtacccatttcaaaatcttttgttggccaagtt
tatggtacaaaagatattcctatccgttctcgagtagaaggttacttggaaggtattcac
ttcaaagaaggtagcagagtaaaaaaaggtcaactgttatatacagtcgatcctcagaca
tatgctgctgaagtaactatgttaaaaagtaaattagcagaagcggaagttactttaata
cgagctaaaaacgatttagccagaattaaacctttggcagaaaaaaatgccgtttcaaaa
tcagatcttgatgctgcccaagcagaaaaggatgctgccgaatctatggttgctgcagct
aaggcgaatttaagaatgtctcaaatcgaattgggatatacgactattaaatcgccaatt
tctggtatcatcggtagaactgaagctaaagtaggtgaattcgttggtagagaccctaac
ccagtaatcttgaatacagtttcgagaatcgattcagtaaatgtgaggttctacatcaat
gaaaatgattatttaagattagctcgttattctattaataacaaagaaaacgaaagaaga
caaagcgaaaatgaggatgtcaataagttagatttgattttctctgataacacagtatat
aatcataaaggacatttcgatttcctagatcgtaatgtagatgcgaatacaggtgccatt
ttaattcaagcgacattccctaataacgaaggactaattagacctggacaatttgccaag
gtgagatctaccattgaaattgtaaaagatggtgtgttggttcctcaaagagccgtaatg
gaattccaaggcaaatattccgtgtttgttgttaacaaagaaggaaaagttgctcaaaga
gctatcaaattagctagacactcttacaaagattacttccttgttagagagggcttgaaa
aaaggagaaaagattgttctagaaggacttcaaaaagttcgtgaaggagcaacaatcaaa
tacaaagtagttcaattcgaatcacagcacgaaggagcataa
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