Flammeovirga sp. MY04: MY04_2649
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Entry
MY04_2649 CDS
T04442
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
flm
Flammeovirga sp. MY04
Pathway
flm01501
beta-Lactam resistance
flm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MY04_2649
01503 Cationic antimicrobial peptide (CAMP) resistance
MY04_2649
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
flm02000
]
MY04_2649
01504 Antimicrobial resistance genes [BR:
flm01504
]
MY04_2649
Transporters [BR:
flm02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
MY04_2649
Antimicrobial resistance genes [BR:
flm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
MY04_2649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
ANQ50018
LinkDB
All DBs
Position
1:3308429..3311590
Genome browser
AA seq
1053 aa
AA seq
DB search
MSKEQIQSNFFVRRPIVAMVIAIIMTIVGGVSILGLPIEQYPNLTPPIVKISATYTGASA
LNVEQSVATPLEQEINGVENMIYMKSINSNDGTLQIQTSFEIGTDPDMSTVFTQNRVATA
TPKLPDAVKRTGVKTEKSLPNILMLITLTSPDGRYDQNFLGNYSLINIKDVLARTKGIGS
VAVLGTSDYSMRIWVKPDRLAKLNLTIPEIKNAISNQNVIVPGGKFGAEPAPKGTEFTYT
VLLPDRLQSEEEFGNIVVRTNKDGSRVLLSDVARIELGVETYSAFTRLNGNNCAVIAIYQ
APGSNAVDLADQMITKMEALKEDFPNGIDYKVSLDSTKPITAGINEIIETLFVALLLVVL
VVYVFIQDWRATLVPTMAIPVSLVAAFMLFPLLGFTINVLSLLGLVLAIGIVVDDAIVVV
DAVQVYLEEGYSPKDATNKAMGEVTAPVIATTLVLVAVFIPVAAMSGITGRLYQQFAITV
AVSVCFSSLNALTLSPALCGLILRKTEPVGGPLGAFFKVFNNVFDRSTKSYLSVTKIATR
KILMSCAFIGVTLLAAGWLGVKVPVGFIPEEDQGYIYINAQLPVASSLQRTNDLAQKVEK
IVAQVPEIDMNTTVAGYSLLSSSNSTNSAFFFVTLKSWDERELTAKQVVNKLNYLFATQI
NEAKIFAFGPPAIPGLGNGSGFSIMIQDKGGNTPDYLANYTNEFIKAANARPEIGMAFTT
FESSVPQRFIDINKDKILKLGVSLDDVYTTFAAFLGGSYINDFNRFGRLYRAYVQAEPEY
RNDEKQLDMFYVKSASGAKVPLSTLVNVEKISGPEFTNRFNLLRSVEVTGSPAKGYSSGQ
AMDALEEVAKEVLPDNMTFSWNGMSYQEKKSSGSVFIIFAFSLIFVFLILAAQYESWSMP
FSILLGTPFAIFGAFFLLWVARFFSESYENNIFAQISLVMLIAMAAKNAILIVEFAKLKF
DEGLSLFDAALESAKLRFRPILMTAFSFILGVLPLVVATGSGAEARKVMGMALLGGMGMA
TILGLFLYPMLFVLVGKIAGYEKDREKSNTSEA
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaacaaattcaatcaaacttttttgtgaggcgaccgattgtcgccatggtc
attgccattatcatgaccatcgttggtggtgtttcgattctaggacttcctattgaacag
taccccaaccttactcctcctattgtaaaaatatctgcaacttatacaggagcgagtgca
cttaacgtagaacaatctgtagctacacctttggaacaagaaattaatggtgtagaaaac
atgatctatatgaagtccatcaactctaacgatggtactttacaaatccaaacttctttt
gaaatcggtacagatccagatatgagtacggtatttacacaaaaccgtgtagctactgcc
actcctaaacttccggatgccgttaaaagaacaggtgtgaaaacagaaaagtcacttcca
aacatcttaatgttgatcacgttgacctctcctgatggtagatacgatcaaaacttctta
ggtaactactctttgattaacatcaaagacgtgttggcaagaacaaaaggtattggtagt
gttgctgtactaggtacatcagattattcgatgcgtatttgggtgaaaccagatagatta
gccaaactgaatttaactatccctgaaatcaagaatgcgatctctaatcagaacgtaatt
gttccaggtggtaaatttggtgccgaacctgctcctaaaggtacagaattcacttacaca
gtactacttccagaccgtcttcaatcagaagaagaatttgggaacatcgttgttagaacc
aacaaggatggtagccgagtactattaagcgatgtagctagaattgaattaggtgttgaa
acatattcagcatttactcgtctgaacggtaacaactgtgctgtaattgccatttatcaa
gcaccaggatcaaatgcggtagatttagcagatcaaatgatcactaaaatggaagcacta
aaagaagacttccctaacggtattgattataaagtatcacttgattcgacaaaacctatt
acagcgggtatcaacgaaattattgaaacattattcgttgccctactacttgtagtattg
gtagtatatgtgtttatccaagactggagagctacattggtaccaacaatggcgattcca
gtatccctagtggcggcatttatgctattcccactcttaggatttacaattaacgtacta
tcacttctcggtcttgtactcgccattggtattgtagtggatgatgccattgtagtagta
gacgccgtacaggtatatctcgaagaagggtatagtcctaaggacgctaccaataaagca
atgggcgaagtaaccgctcctgtaattgccactactctagtacttgttgccgtatttatt
ccagtggcagccatgtcgggtattaccggtcgattgtaccaacaatttgccattacagta
gcagtttcagtatgtttctcttcactaaacgccctgacattatcacctgcactttgtgga
ttgatactaagaaaaacagaacctgttggtggtccattgggagcattctttaaggtcttc
aataacgttttcgatagatctacaaaatcatacctcagtgtaactaaaattgccactcgt
aagattttgatgagttgtgcatttataggagttacactactagctgcaggatggttaggt
gttaaagtacctgttggtttcattcctgaagaagatcaaggatacatctatatcaacgct
caattaccagtagcttcatcattacagagaacaaacgatttagcccaaaaagttgaaaag
atcgttgctcaagttcctgaaatcgatatgaacactacagtagcaggttattcacttctt
tcaagtagtaactctactaactcggctttcttcttcgtaactttaaaaagttgggatgaa
agagaattaacagccaagcaggtagtgaataagttaaattatttatttgctacacaaatt
aatgaagcaaaaatctttgcctttggccctccagccattccaggtttaggtaatggatca
ggtttcagtatcatgatccaagataaaggaggtaataccccagattatctagccaattac
accaatgaattcattaaagcggccaatgcaagaccagaaattggtatggcatttactact
tttgaatctagtgtacctcaaagatttattgatataaataaagataagatcttaaaattg
ggcgttagtctggatgatgtttataccacattcgctgccttccttggaggatcttatatt
aacgacttcaaccgttttggtcgtctatacagagcttatgtacaagcagagcctgaatat
agaaacgatgagaaacagttggatatgttctatgtaaaatcggcaagtggggcaaaagtt
cctttatcaactttagtaaatgttgaaaaaattagtggtccagaatttacaaaccgattt
aacttacttcgttctgtagaagttaccggttctcctgccaaaggatacagttccggtcaa
gcaatggatgcattagaagaagtagcgaaagaagtacttcctgataacatgactttctct
tggaacggcatgtcctaccaagaaaagaaatcatctggatctgtatttatcattttcgcc
ttctcattaatcttcgtattcttgattcttgcagcccagtatgaatcatggtcgatgcca
tttagtattctattgggaactccattcgccattttcggtgccttcttcctattatgggta
gcaagattctttagtgaaagttacgagaacaacatatttgctcaaatatcattagtaatg
ttgattgccatggctgcaaagaacgccattctgattgtcgaatttgccaaattaaaattc
gatgaaggattgtctctatttgatgcggcattagaatctgcaaaactaagattccgtcct
atcttaatgacggccttctcatttatcctaggtgttttaccattggttgttgccaccgga
tcaggtgcagaggcacgtaaagtaatgggtatggcacttcttggtggtatgggtatggca
accattttaggtctattcttatatccaatgttattcgtgcttgtaggtaaaattgcaggt
tatgaaaaagatagagaaaaatcgaacacatcagaagcatag
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