Flavobacterium sp. WV_118_3: ABFU83_07570
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Entry
ABFU83_07570 CDS
T10639
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
flr Flavobacterium sp. WV_118_3
Pathway
flr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
flr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABFU83_07570 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flr03400
]
ABFU83_07570 (nth)
Enzymes [BR:
flr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ABFU83_07570 (nth)
DNA repair and recombination proteins [BR:
flr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABFU83_07570 (nth)
Prokaryotic type
ABFU83_07570 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_2
Ogg-HhH
EndIII_4Fe-2S
Ribosomal_S13
HHH_5
Motif
Other DBs
NCBI-ProteinID:
XBB77290
LinkDB
All DBs
Position
1623290..1623931
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AA seq
213 aa
AA seq
DB search
MDLFSDPMPWSEKLNPIVVQYQDRKHPLAYQNPYQLVIMVILSAQDSDANINKIAPALFN
RFPNFESLVSATFEDLFPYISGVRHFQMKAGWILETAQMLKSDANIPLSMEVLTQLKGIG
RKSANVIMKELQVRPAVGIIVDLHVLRVAPRIGLIPATQDGTKAEKLLMQLLPRDIWEDI
GMCISFLGREICRPTSPKCTICPIHQHCIYHNN
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggatttatttagtgatccgatgccttggtcagaaaaattaaatcctattgtcgttcaa
tatcaggatcgcaaacaccctttggcctatcaaaatccgtatcaattagtgatcatggta
attctttccgctcaggattccgatgccaatattaataaaattgctccggcactttttaat
cgttttccgaattttgaaagtcttgtttcggctacttttgaggatttatttccctatatc
agtggggttcgtcattttcagatgaaagccggatggatactggaaaccgcacaaatgctt
aaatcagatgccaatatcccgctttccatggaagtattaacacagttaaaaggtattggt
cgtaaatccgcaaatgtgatcatgaaggagttacaggttcgaccagctgttggtattatc
gttgaccttcatgttttacgcgtagccccgaggattggcttaatccctgctactcaggat
ggtactaaagctgaaaaattattaatgcaacttttgccacgcgatatttgggaagatatt
gggatgtgcatctcgtttttaggacgtgaaatttgtcggccaacgagtccaaaatgtaca
atttgcccgattcaccaacattgcatatatcacaataattaa
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