Candidatus Fluviicola riflensis: CHH17_09980
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Entry
CHH17_09980 CDS
T05019
Name
(GenBank) cystathionine beta-synthase
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu00260
Glycine, serine and threonine metabolism
flu00270
Cysteine and methionine metabolism
flu00670
One carbon pool by folate
flu01100
Metabolic pathways
flu01110
Biosynthesis of secondary metabolites
flu01230
Biosynthesis of amino acids
Module
flu_M00035
Methionine degradation
flu_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CHH17_09980
00270 Cysteine and methionine metabolism
CHH17_09980
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CHH17_09980
Enzymes [BR:
flu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
CHH17_09980
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
CBS
Motif
Other DBs
NCBI-ProteinID:
ASS49050
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All DBs
Position
2354114..2355475
Genome browser
AA seq
453 aa
AA seq
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MKIYNNILETIGNTPLVKLNKLTADVKATVLAKVETTNPGNSVKDRMAVKMIEDAEASGL
LKPGGTIIEGTSGNTGMGLALVAIIKGYKLICVLNDKQSKEKMDILRAVGAEVVVCPTAV
EPTDPRSYYSVSKRLAKEIPNSWYVNQYDNLSNRIAHYEQTGPEIWEQTDGKVTHFVVGV
GTGGTISGVGKYLKEKNPNIKIWGIDTYGSVFKKYKETGVFDENEIYPYITEGIGEDILP
ANVDFDVIDLFEKVTDKDAAVYTRRLAREEGIFVGNSAGAAIGGLLQLKDKLTADDVVVV
LFHDHGSRYVGKIFNDDWMRERGFLDENLRTAEDLIARHADQPLVTLYSEELVSHAIMKM
RKFNISQIPVLKDGQFVGSLSDNQVYQLLVDNPTLRDTPISKVMQAPFPVVQSTTKIEDV
AKLINNDVPAVLVERSNGNKHILTRQDIISSLS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatctacaacaatatattggaaaccatcgggaatacgccgttggtgaaattgaat
aaactgaccgctgatgtcaaagcgaccgtgcttgccaaagtggaaacaaccaatcccgga
aactcggtaaaagaccggatggccgtgaaaatgatcgaagatgctgaagcttcaggtttg
ttaaaaccaggaggaacaatcattgaaggaacttcaggaaatacgggaatgggccttgcc
ttggtcgcgatcattaaaggttataaattgatttgtgttctcaacgacaagcagtcgaaa
gagaaaatggatattttgcgtgctgttggcgctgaagtggttgtttgtccgaccgctgtt
gaaccgacagatccgcgttcttattactcggtttccaaacgtttggcgaaagaaattccg
aattcgtggtacgtaaatcagtacgataacttgtcgaaccgaatagcgcattacgaacaa
accggtcctgaaatctgggaacaaaccgacggaaaagtcacgcactttgttgtgggagtt
ggaactggtggaaccatttccggagttggcaaatacctgaaagagaaaaatccgaacatc
aaaatatggggaatcgacacctacggatcggtgttcaaaaaatacaaggaaacaggtgtt
ttcgacgagaatgaaatctatccgtacatcacggaagggattggtgaagatattttgccg
gcgaatgttgacttcgacgtgatcgacctttttgaaaaagtaaccgataaagatgcggct
gtttatacccgcagactggcacgcgaagaaggaatctttgtagggaattcggccggtgca
gctatcggtggattgttgcaactgaaagacaaactgacagccgacgatgtggttgtagtg
ttattccacgatcatggaagccgttatgttgggaaaatcttcaacgacgattggatgcgt
gagcgcggattcctggacgagaacctgagaactgccgaagatttaattgctcggcatgcc
gaccagcctttggttactttgtattcggaagaattggtttcgcatgccatcatgaaaatg
cgcaaattcaatatttcgcagattccggtactgaaagacggacagtttgtaggatcgctt
agtgacaaccaggtttaccaattgctggttgacaatcctacgttgcgtgatacgccaatt
tccaaagtaatgcaggcgcctttcccggttgtgcagtcaaccaccaaaattgaggatgtt
gccaaactgatcaataacgatgttcctgctgttttggttgaacgctccaacggtaacaag
catattttaacgcgccaggatattatttcatcattgtcctga
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