Candidatus Fluviicola riflensis: CHH17_17310
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Entry
CHH17_17310 CDS
T05019
Name
(GenBank) isoleucine--tRNA ligase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CHH17_17310
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
flu01007
]
CHH17_17310
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
flu03016
]
CHH17_17310
Enzymes [BR:
flu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
CHH17_17310
Amino acid related enzymes [BR:
flu01007
]
Aminoacyl-tRNA synthetase
Class I (U)
CHH17_17310
Transfer RNA biogenesis [BR:
flu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CHH17_17310
Prokaryotic type
Other AARSs
CHH17_17310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1f
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
ASS50454
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All DBs
Position
4012151..4015642
Genome browser
AA seq
1163 aa
AA seq
DB search
MSQKYQEYNRLDLPNVAEEVLQKWKANAVFEASVSSREGKTPYVFFEGPPSANGLPGIHH
VMARSIKDIFCRYKTLKGFQVKRKAGWDTHGLPVELGVEKELGITKEDIGTKISVEEYNK
ACREAVMRYTDIWNRLTEKMGYWVDMNDPYITYEPKYMESVWWLLGELYNKNLLYKGYTI
QPYSPAAGTGLSSHELNQPGCYQDVKDTTVVAQFKVLDGSASPFGGGLRGRTSDENTFSE
NTFFLAWTTTPWTLPSNTALCVGPKIDYVLVETFNQYTHEPINVILAKDLVSIQFGKGYE
YAANIDLEELEKDENSGALILRDDQKFLNYKPGDKTIPYFISGSCKGSDLVGIRYEQLLP
GALPYEKPEEAFRVISGDFVTTSDGTGIVHIAPTFGADDARVATESGVPAMLVLDENNNP
VPLVDLRGRFRKEVPQWAGMFVKNEYYADDEKPEKSVDVQISIFLKEQNRAFKVEKYEHS
YPHCWRTDKPVLYYPLDSWFIKVTDVKERMVALNNTIQWKPESTGTGRFGNWLENANDWN
LSRSRYWGIPIPIWSTEDRAEQICISSVEQLKAECDKAVAAGVMAENPLAGFVPNDFSEE
NYAQLDLHKNYVDLIVLVSPSGKPMKRESDLIDVWFDSGAMPYAQWHYPFENKNLIDSGA
GFPADFIAEGVDQTRGWFYTLHAIATMVFDSVAYKNVVSNGLVLDKNGVKMSKRLGNAVD
PFETLAEYGPDATRWYMITNAQPWDNLKFDKDGITEVQRKLFGTLYNTYSFFTLYANIDG
FSYAEDEIALNERPEIDRWILSKLHTLTAQVDLAYESYEPTRAGRLIQEFVSDQLSNWYV
RLCRRRFWKGDYSADKISAYQTLYTCLETVALLASPIAPFYPDQLFTDLNNVTGKHAVNS
VHLADFPVSDPSLIDTELEAQMDIAQRVSSLVLALRKKEKIRVRQPLQKIMVPILNEQFA
KNILHVKELILSEVNVKELELLDASNTVFVKSIKPNFKTIGPKYGKQMKAIAALVAEFDQ
GDIAGVELNAGWKGEVMGDVIELDLPDFEIRAEDIPGWLVASEGGMTVALDSTITEELRQ
EGIARELVNRVQNLRKDSGLEVTDRIQLTLESTAEIQSAIAQNQEYVCNEVLATKITFGK
VDVSPQVIDLLEEGDAKIGLVKA
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaaatatcaggaatacaatcgattggatttgcccaatgtggcagaagaagtg
ttgcagaaatggaaagcaaacgctgtcttcgaagcatccgtttcttcgcgtgaaggaaaa
accccgtacgttttctttgaaggcccgccttcggcaaacggattaccaggaattcaccac
gtaatggcccgatcgattaaagatattttttgccgctacaaaaccctgaaagggttccag
gtaaagcgtaaagccggttgggatacgcatggtttgccggttgaattgggcgtggaaaaa
gaattgggaatcaccaaagaagacatcggcaccaaaatttcggtcgaagaatacaacaaa
gcctgtcgtgaagcagtcatgcgctacaccgacatctggaatcgcctgaccgaaaaaatg
ggatattgggtcgatatgaacgatccttacatcacctacgaacccaaatacatggaatcg
gtttggtggttgctgggcgaattgtacaacaagaatttattatacaaaggatatacgatt
caaccgtattctccggccgctggaaccggtttgtcatcgcacgaactgaaccagccgggt
tgttaccaggatgtaaaagatacaactgttgtcgcacaatttaaagttttagacggctct
gcctccccctttggagggggattgagggggaggacatctgatgagaatactttttcagaa
aacaccttcttcctcgcctggacaacaactccatggacacttccttccaataccgcattg
tgcgttggcccgaaaatcgattacgtattggtagaaacgtttaaccaatatactcacgag
ccgatcaatgtgattcttgcgaaagatcttgtaagcattcaatttggaaagggttatgaa
tatgctgcaaatattgatttggaagaattagagaaagatgaaaattctggtgctctaatt
ttgagagatgatcaaaagttcttgaattataaacctggagataaaaccattccttatttc
atctccggttcctgcaaaggctccgatttagtcggcattcgctacgaacaattgcttccc
ggagcattgccatacgaaaaaccggaagaagcgttccgcgttatcagtggtgattttgtt
accacatcagacggtacgggaatcgtacatattgcaccgacctttggtgcggatgatgcg
cgcgttgctacagaatcgggcgttcctgcgatgctggtattggatgaaaacaacaatccg
gttccgctggtagatttgcgtggacgtttccggaaggaagttccacaatgggccggcatg
tttgtgaaaaacgaatactatgccgacgacgagaaaccggagaaatcagtcgacgtacaa
atctcgatctttttaaaagagcagaaccgtgcgttcaaagtcgagaaatacgaacacagt
tatccgcattgctggcgaaccgataaaccggttttgtattatccgctcgactcctggttt
atcaaagtaaccgacgtgaaagaacgtatggtagcgttgaataataccattcagtggaaa
ccggaatcgaccggaacgggacgttttggaaactggctcgaaaatgccaatgactggaac
ctgtcgcgctcgcgttattggggaattccgatcccgatctggtctacagaagaccgtgca
gagcagatctgcatcagttcggttgaacaactcaaagctgaatgcgataaggcagtggcc
gcaggagttatggcggaaaatccgttggcgggttttgtgccgaatgatttttcggaagaa
aattatgcgcaactcgatttacataaaaattatgtcgatttgatcgtattggtttcacct
tcaggcaaaccgatgaagcgtgaaagtgatttgatcgacgtgtggtttgattcgggcgca
atgccttatgcacaatggcattatccatttgaaaataaaaatctgatcgattcgggagcc
ggttttcctgccgatttcattgctgaaggcgtggatcaaacccgtggctggttttatacc
ctgcatgcaattgcgacaatggtttttgacagtgttgcctacaaaaatgtggtttccaac
ggattggtacttgataaaaacggcgtgaaaatgtcgaaacgattggggaacgctgttgat
ccgtttgaaacattggctgaatacggccctgatgcgacgcgctggtacatgatcaccaat
gcgcaaccgtgggacaatctgaaatttgataaagatggaattaccgaggtgcaacgcaag
ttgttcgggacgctttacaatacttattcgttctttactttatacgccaacatcgacggt
ttctcatatgccgaagatgagatcgcattaaacgaacgtcctgaaattgaccgttggatc
ttatcgaaactacacacattgaccgcgcaggttgatctggcatacgaaagctatgaacca
acacgtgccggacgtttgatccaggaatttgtttccgatcaactctccaattggtatgtg
cgcttatgccgtcgtcgtttctggaaaggtgattattcggcagataagatttcggcctac
caaacactttatacttgtttggaaactgtggccttgcttgcttcgccgattgcgccgttc
tatcccgatcagttgtttaccgatttgaataacgtcaccggaaaacacgctgtaaattcg
gtgcatttggctgatttcccggtaagtgatccatcattgatcgatacggaactcgaagca
caaatggatatcgctcaacgcgtttcgtcattggtattggccttgcgtaaaaaggagaaa
atccgtgtgcgtcagccattgcagaaaatcatggtcccaattctcaacgagcagttcgcg
aaaaacattctgcatgtaaaggaattgattctttcagaagtaaacgtaaaagaactggag
ttactcgatgcgtcgaacacggttttcgtgaaatcgattaaaccgaatttcaaaaccatc
ggaccaaaatatggtaagcaaatgaaagccattgctgctttggttgccgagtttgatcag
ggcgatatcgccggagtagaactcaatgccgggtggaaaggtgaagtcatgggagacgtg
atcgagttggatttacccgattttgagatccgtgccgaagatattccgggttggctggtt
gcttccgaaggcggaatgaccgttgctttggacagcaccatcacagaagaattacgccag
gaaggaattgcccgcgagttggtgaaccgtgttcaaaacctgcgaaaagattccggactg
gaagtcacagaccgtattcaactgacgttggaaagcactgctgaaattcaatcggcgatt
gcccaaaaccaggaatatgtgtgtaacgaggttttggcaaccaaaatcaccttcggaaag
gtagatgtttccccgcaagtaattgatttattggaagaaggtgacgcaaagattggattg
gtgaaagcgtaa
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