Fulvivirga ligni: LVD16_08355
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Entry
LVD16_08355 CDS
T09288
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
flw
Fulvivirga ligni
Pathway
flw00300
Lysine biosynthesis
flw00550
Peptidoglycan biosynthesis
flw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LVD16_08355
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LVD16_08355
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
flw01011
]
LVD16_08355
Enzymes [BR:
flw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
LVD16_08355
Peptidoglycan biosynthesis and degradation proteins [BR:
flw01011
]
Precursor biosynthesis
Amino acid ligase
LVD16_08355
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
SRP54
Motif
Other DBs
NCBI-ProteinID:
UII23237
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Position
1868341..1869804
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AA seq
487 aa
AA seq
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MPVLKDILYKVSLVSTSGDMEREVKSIAFDSRKVEEDTLFVAIKGTQSDGHEFIEKAIAS
GATVVVCEEMPGEINPAVTYVAVADSSRALGFISSNFYGEPSTKLKLVGVTGTNGKTTVA
TLLFNLYVKMGYKTGLLSTVNNRIGDEIIPSSHTTPDALSLNQLLAKMVESGCEYAFMEV
SSHAIQQERIAGQLFAGAIFTNISHDHLDYHKTFDAYISAKKKLFDDLPSTAFALVNVDD
KRGRIMLQNTKATKNTFALKSVAEFKGKMIANTLQGLEMDINNKNVWFRLIGDFNAYNLL
AVYATSVLLGKDADEVLTQLSVLEGAPGRFEQVISPSKITAIVDYAHTPDALQNVLETIN
NFRTGNERVITVVGCGGNRDKTKRPLMASIACKLSDKVILTSDNPRNEDPMEIIKDMQEG
VGPVDYKKTVVIADREEAIKTSCMLAGENDIILVAGKGHETYQEINGVKHPFDDKEVLSR
MLNLFAN
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttttaaaagacatattatataaagtatcattagtttctacctctggagatatg
gagcgagaggtgaaatctattgccttcgattcccgaaaggtagaagaggatactttgttt
gtggctatcaaaggcactcagtcagatgggcatgaattcattgaaaaggccattgcttca
ggtgctacggtagtggtatgtgaagagatgcctggtgagattaaccctgctgtaacttat
gtggcggtagctgatagctccagagctttaggcttcatttcttctaatttttatggtgag
ccatctaccaagctaaagctggtaggtgttaccggtaccaatggaaaaaccacagtagct
accttgcttttcaacctatatgtaaaaatgggttataaaacaggtttgctatctactgta
aataatagaataggtgatgaaattattccttcatcacacactacgcctgatgctttgagc
ttaaatcagcttttagctaagatggtggagagcggctgtgaatatgcttttatggaggtg
agttctcatgccattcagcaggagcgcatcgctggtcagttgttcgcgggagctattttt
accaatatctctcatgatcatttagactaccataaaacctttgatgcttacatttctgct
aagaaaaagctgtttgatgatttgccatctactgcttttgctttggtaaatgtagatgac
aagagaggtcgtatcatgttgcaaaacacgaaggctactaaaaatacatttgcactaaaa
agtgtagctgagttcaagggtaaaatgatagcgaataccctccaaggccttgaaatggac
atcaataacaagaatgtttggttcagacttattggtgattttaatgcttataacctacta
gcggtatatgctacttcagtgctgttgggtaaggatgctgatgaggttttaactcagtta
tcagtgctggaaggtgccccgggaagatttgagcaagtgatatcaccatctaagataacc
gcaatagtggattatgcccacacaccagatgcattgcaaaatgtgctggagaccatcaat
aacttccgaactggaaatgaaagggtgatcaccgtggttggttgtggtggtaatagagat
aaaacaaagagacctttaatggcctctattgcttgtaagctgagtgacaaagtgatcctt
acttctgataatcccagaaatgaagatcctatggagatcattaaggacatgcaggaaggt
gtaggtcctgtagattataagaaaacagttgtaattgctgacagagaagaggctattaaa
acctcatgtatgctggcaggtgaaaatgatattattctggtggccggtaaaggccatgaa
acatatcaggaaataaatggagtgaagcatccctttgatgataaagaggtgctgagtaga
atgttgaacttatttgctaactga
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